Sphingopyxis fribergensis: SKP52_24265
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Entry
SKP52_24265 CDS
T03542
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_24265
Transporters [BR:
sphk02000
]
Other transporters
Pores ion channels [TC:
1
]
SKP52_24265
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
AJA11695
UniProt:
A0A0A7PNW6
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All DBs
Position
pSfKp5.2:114292..116886
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AA seq
864 aa
AA seq
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MSVRGQIFTSAIAISAALVCTPAAAQSEQRRGYQLEAQDLGSALRAVGRTSNSEIFFETE
IVDGKRAPALKGQYTPREAVEALIQGTNLVILERRGAIIIRERFPASQAAVNDSSGQSEI
IVTGSRIRGGPATSPITSISRRDAERAGQTDLGQVIRDLPQNFSGGQNPTIAPTGQGSFS
NVSGSSTLNLRGLGPDASLTLLNGHRVAFDAISQGIDISAIPLAAIERVDVITDGASALY
GSDAVAGVANIILRRSFDRLFTSARIGAATEGGAFAQQYSAVGGPSWNGGSVMLAGDFSR
TGEIKGRQRSYTSNLLPDSTVLPGQKQLSIVLAGRQEISDRSVFEIDGHFTHRTTARCIS
PTSAAVSISCYRQGSVVASGVDSWSVSPAFRFSLPSGWNLNILGTYSQSNNTISNLTYAG
GLETMRVLPNYDNSLRSGEAGAEGPIFGLPGGDARLAIGAGYRSNRLRVDSRRIVGGVEA
PIDVFRESREVLFGYGEVSLPLISETNAVAFASKLQVNGAIRIEDHRGIDRVTTPKLGLI
YAPINGLELKANWGRSFKVPTLFQTGQTTNAQLVPGFIFNPAPANANPVLLVFGGNGNLQ
PERATTLSLSSSIEPAGLPGLRIDLGYFRIRYKNRVAEPISPVTSALLQVFGDFVALNPS
ATDVLSSVDGLTGTFANFTGAPFDPGAVAAIVNDQLQNISLQSAEGFDGSVSFLHDLGDD
RTLSFKGALSYLDSSRRITTALPSMPQAGLIFQPPHWRGRMSASWEEANFVLSASGSFVG
GTKDNRFQPSARVQSFVTFDTVATFRSARASGPLSGTNLTIAIQNLFNEKPSLIRTVDPA
AFRYDSINHSPFGRVISLTLSKAW
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaggggccaaatctttacgtccgcgattgcgatcagtgcggcgctggtttgc
acacccgcggccgcgcagtctgagcagcgccgcggttatcaactcgaagcccaggatttg
ggttctgcattgcgcgcggtcgggcgaacgtcgaacagcgagatattcttcgagacggag
atcgtagacggaaagcgagcgccagccctgaaagggcaatacacgccccgcgaggccgta
gaagctctgatccaagggacgaacctcgtcatcctcgaacggcgaggggcgatcattatc
cgtgagcgatttcccgcgtcgcaagcggcagtgaacgatagcagcggtcaaagcgagatt
atcgttaccggatcgcgcattcgcgggggccctgcgacgtcccccatcacgagcatctct
cgacgagatgcggagcgggcgggtcaaaccgacctcggtcaagtgatccgcgatctcccg
cagaacttctcgggcggtcagaatcccacgatcgcgccgacgggccaaggcagtttttcg
aacgtctccggttcttcgactctcaatctgcgaggtctgggcccagatgcgtcgctgacg
cttttgaacggtcatcgcgtcgcattcgatgccatcagtcaaggcatcgatatctcggca
ataccgctggcggcgattgagcgcgttgatgtgataaccgacggcgcatcggcactctat
ggctcggacgcggtagccggcgtcgccaatattattctcaggcgcagctttgaccggttg
ttcacttccgcgcggatcggcgccgcgacagagggtggagcctttgcgcagcaatatagc
gctgtaggaggtccttcgtggaacggtggtagcgttatgctcgccggcgacttctcccga
actggcgaaatcaaaggacgacagcgatcctataccagcaaccttcttcccgactccact
gtcttgcccggtcaaaagcaattgagcatcgtcctcgcaggcaggcaggaaatctccgat
agaagtgtcttcgagattgacggccactttacgcatcgcacgacggcgcgctgtatttcg
ccgaccagtgccgccgtttcgataagctgctaccggcaagggagtgttgtcgcctcgggc
gtcgacagttggtctgtgtccccggcattccgcttttcactgccctcgggttggaatctg
aatatcctaggaacttacagccagagcaacaacacgatctcgaatctcacatatgccggc
ggcctcgagacaatgcgcgttttgcccaattatgataatagcttgaggtcgggcgaagct
ggcgcagaggggccaatttttggtttgcccggcggcgacgcaagattggccatcggggcg
ggttatcgctccaatcgtcttcgcgtcgattctcgccgaattgttggtggcgttgaggcg
ccgatcgatgtttttcgtgaatcgcgcgaagtcttgttcggctacggcgaagtgtcgttg
ccgctgatttcagagacaaatgcggtcgccttcgcaagcaaactgcaggtgaatggcgca
atccgcatcgaggatcataggggaatcgaccgtgttacgacgccgaagctggggctgatt
tacgcgcccatcaacgggttagaactcaaagcaaattggggcagatcgttcaaggttccg
acgctcttccagacgggccaaacgacgaatgcacagttggtgccggggttcattttcaac
cccgcgcccgcaaacgccaatcccgtgctcttggtatttggcggcaatgggaaccttcag
ccggaacgtgcgaccacattaagtctgtcatcgtcgatcgagcccgcgggcctccccggg
ctgaggatcgacttgggatacttcagaattcgatataaaaatcgcgtcgcggagccgatt
tctccggtgacaagtgcattgctccaggtgtttggcgactttgtagcgctcaatccatcg
gcgacagacgtgctctcgagcgtcgacggccttaccggcacattcgcaaattttacaggc
gcccccttcgatcccggcgcggtcgcagcgatcgtcaacgatcagctccagaatatatct
ctgcaatcggccgaaggtttcgacggatcagtgagttttctccatgatcttggagacgac
aggacgttgtcattcaagggcgcgctgagctacctcgatagctctcggcggataacgacc
gctcttccgtccatgccgcaagcgggcttgatatttcagccgccacactggcgcggaaga
atgagtgcgagctgggaggaagccaatttcgttctgagtgcgtccggatcatttgttggc
ggcaccaaagacaatcgattccagccgagtgcgagagtgcaatcctttgtgactttcgac
actgtcgcgacgttccgaagcgcgagggcgagcggcccactgtcgggcacgaatttgacc
atcgctattcaaaatttgttcaatgagaagcccagcctcattcgaacggtcgatccggcg
gcattccgatatgactcgatcaatcattcgccatttgggagggtaataagcctgacgttg
tcgaaggcttggtga
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