Sphingorhabdus lutea: LPB140_00050
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Entry
LPB140_00050 CDS
T04602
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03030
DNA replication
sphl03430
Mismatch repair
sphl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB140_00050
03430 Mismatch repair
LPB140_00050
03440 Homologous recombination
LPB140_00050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphl03032
]
LPB140_00050
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_00050
Enzymes [BR:
sphl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB140_00050
DNA replication proteins [BR:
sphl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB140_00050
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB140_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
APG61499
UniProt:
A0A1L3J8N8
LinkDB
All DBs
Position
9015..10061
Genome browser
AA seq
348 aa
AA seq
DB search
MAYGGGQKIDNLGQLKAAYDNPGRYKMLFLYGPDESEISYIVKKFLAHIGNNVEHILLNG
DQLRSDPALLSDEANAISLFGEKKIIHAEIKRDEAMTAIEYYLQGPAGEHVVLVQSGNLT
KANKLRKLVEADKSVLSLIVYEAKSDVLFGRLNGHAKSLGLIVKPDLIRAILARVNMNIH
LAMMEMEKLSLYHDASIDNPKEIEEQAIIDLAADKADDDIAPLINAALSGQVKITVKELN
NARAVKMEPVRLLRLMMYRVQQLIQISQDMASGKKFDNATRGIFYGLKPILEQQVKLWPA
QRLFGLNGHLIDMEETVMTIGGQSAITYMEAEILRIAKTASRRRQPGK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcatatggcggcggccaaaaaatagataatttgggccaattaaaggcggcatatgac
aatccgggccgttataaaatgctgttcctttatgggccggatgaatccgaaatatcctat
atcgtcaaaaaattccttgcccatattggaaataatgtcgaacatattttgttaaatggc
gatcaattgcgcagcgaccctgccctattatccgatgaggccaatgccatatccttattt
ggcgaaaaaaaaatcatccacgctgaaataaaacgtgatgaggcaatgaccgccattgaa
tattatttacaaggtccagcaggtgagcatgtcgttttggtgcaaagcggcaatttgacc
aaggccaataaattacgcaaattggtggaagcagataaatcggttttatcattgatagta
tatgaggccaaatccgatgtcctatttggccgattaaatggccatgcaaaatcgctgggt
ttaattgtaaaacccgatttaatcagggcgatattggcgcgggtgaatatgaatattcat
ttggcgatgatggagatggaaaaattatcgctttatcatgatgccagcatagataatccc
aaagaaattgaggaacaggcaatcatcgaccttgcagcggataaggcggatgacgatatc
gcccccttaatcaatgcagcattaagcgggcaggtcaaaattactgtcaaagaattaaac
aatgcccgtgcggttaaaatggaaccagtgcgtttattgcggttaatgatgtatcgtgtg
caacaacttattcaaatcagccaagacatggcatccggcaaaaaatttgacaatgccacg
cgcgggatattttacgggttaaaacccattttggaacaacaagttaaattatggccggcc
cagcggctgttcgggttgaacgggcatttaatcgatatggaagaaaccgtaatgaccatt
ggcgggcaaagcgccattacatatatggaggcggaaatattgcgcattgcaaaaaccgcc
tctcgccgccgtcaaccgggaaaataa
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