Sphingorhabdus lutea: LPB140_00905
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Entry
LPB140_00905 CDS
T04602
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00730
Thiamine metabolism
sphl01100
Metabolic pathways
sphl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LPB140_00905
Enzymes [BR:
sphl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LPB140_00905
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
APG61634
UniProt:
A0A1L3J932
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Position
167110..169008
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AA seq
632 aa
AA seq
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MADIPTKAEIGVTTGPIRGSKKIHVAAKSGSGIRVAMREIYLEPSSGEPPVRVYDTSGPY
TDENILVNIEKGLTELRAPWIRARGDVEEVDQREVKPEDNGQLGPDRSGGVAPFPHVKKK
VLRAKAGQNVSQMHYARKGIITPEMEYVAERENLGRERLAEYKRDGESFGASIPDYVTPE
FVRDEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKMVWSIR
WGADTVMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEDLTWDIFRDTLIE
QAEQGVDYFTIHAGVRLPYVPLAAKRMTGIVSRGGSIMAKWCLAHHKESFLYERFDEITE
IMKAYDVAYSLGDGLRPGSIYDANDEAQFAELYTLGELTKRAWDQDVQVMIEGPGHVPMH
KIKENMTKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEH
LGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAQVRDDALSKARFEFRWRDQFNLSLDPDT
AEQYHDQTLPAEGAKTAHFCSMCGPKFCSMKISQEVREFAANNPNTAFTGLNSDNGDNLA
PAEAEAGMQEMSKVFKDTGSELYMGQGDREHD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcccaactaaagcagaaatcggtgtaaccactggccctattcgcgggtca
aaaaagattcatgttgccgcaaagtccggcagcggcattcgcgttgccatgcgtgaaata
tatcttgagccatcatcgggcgaaccacctgtgcgcgtttatgacacatccggcccctat
accgacgaaaatattttggtgaatattgaaaagggtttgaccgagcttcgcgccccgtgg
attcgcgcgcgcggcgatgtggaggaggttgaccagcgcgaggtaaagccagaggataat
ggacagcttggcccagatcgcagcggcggggtcgcaccctttccccatgtgaaaaagaaa
gttttacgagcgaaggcggggcaaaatgtctcccaaatgcattatgcacgtaaaggcatc
atcacgcccgaaatggaatatgtcgccgaacgcgaaaatttgggccgcgaacgtttggcc
gaatataaacgcgatggggagtcatttggcgcatccattcccgattatgtcacgcccgaa
tttgtgcgcgatgaggtggcgcgcggccgcgccatcattccgtcaaatatcaaccatccc
gaaagcgagcctatggccattggccgcaatttccttgtcaaaattaacgccaatatcggc
aatagcgcggtggcaagcgatgtagcgtcagaggttgataaaatggtatggtccatccgt
tggggtgcggacacggtcatggatttgtccactggccgcaatattcacgatacacgcgaa
tggattatccgcaattcacccgtgccaattggcactgttcccatttatcaggcattggaa
aaagtgggcggcattgccgaggatttaacatgggatattttccgcgatacattgattgaa
caggcggaacagggcgttgattatttcaccatccatgccggtgtgcgcctgccctatgtg
ccgcttgccgccaaacgcatgacgggcattgtttcacgcgggggcagcatcatggcaaaa
tggtgccttgcccatcataaggaaagtttcctttatgaacgttttgacgaaattacagaa
atcatgaaggcatatgacgtcgcctattcattgggtgatggcctgcgccccggcagcata
tatgacgcaaatgacgaggcgcaatttgccgagctttatacattgggcgagcttaccaaa
cgcgcatgggatcaagatgttcaggtgatgatcgaaggcccaggccatgtccccatgcat
aaaattaaagaaaatatgaccaagcaattggaggcatgtggcgaagcaccattttacacg
cttgggccgctcaccaccgatattgcgccgggatatgaccatataaccagcggcatcggc
gcggcgcaaatcggatggtatggcacggccatgctttgctatgtcacgccaaaggaacat
ttgggattgcccgatagggatgatgtaaaggttggcgttgtcacctataaattggccgcc
catgccgccgatttggccaaggggcatcccgccgcacaggtgcgcgatgatgcattgtca
aaggcgcggtttgaatttcgctggcgcgatcaatttaacctgtcgcttgatcccgatacg
gctgaacaatatcatgaccaaacattgcccgcagagggcgcaaagaccgcgcatttttgt
tccatgtgcgggccaaaattttgcagcatgaaaatttcccaagaagtgcgcgaattcgcc
gccaataatcccaatacggcctttaccggattgaatagcgataatggcgacaaccttgcc
cccgcagaggcagaggcaggcatgcaggagatgagcaaggttttcaaagataccggcagc
gagctttatatgggccaaggcgaccgtgagcatgattaa
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