Sphingorhabdus lutea: LPB140_01825
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Entry
LPB140_01825 CDS
T04602
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB140_01825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_01825
Enzymes [BR:
sphl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LPB140_01825
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LPB140_01825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
A6_N
Motif
Other DBs
NCBI-ProteinID:
APG61774
UniProt:
A0A1L3J9H2
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All DBs
Position
370274..371065
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AA seq
263 aa
AA seq
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MTKISTFNINGIKARTPRLLEWLDETAPDIVCLQEVKSQDKDFPKDMFEKAGYGVIFHGQ
KSFNGVAILAKGQEPKEIQRGLEGEPEDEQARYLEAEILDKSGNALRVASIYLPNGNPLP
GPKFDYKLRWMQRLRNRAQILLNEEIPAILCGDYNVIPRDEDVFSVSAMASDALMQPESR
AAYRQYLGDGWSDAFVTKYPAGGVWTYWDYQAGAWPRDNGFRIDHFLLSPIAADRLEHAA
VDKEHRGREKASDHAPLWVQLRD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatttccacttttaacattaacgggattaaggcccgaaccccgcggcttttg
gaatggttggatgaaaccgcgccggacattgtttgtttgcaagaggtgaagtcgcaggac
aaggatttccccaaggatatgtttgaaaaagcaggctatggagtgatttttcatggccag
aaaagtttcaatggcgtggcaattttggccaaagggcaagagcccaaggaaattcagcgc
ggattagagggtgaaccagaggatgagcaggcccgatatttagaggccgagattttggac
aaatcgggcaatgcgctgcgcgtggccagcatttatttacccaatggcaacccattaccc
ggcccgaaatttgattataaattgcgttggatgcagcgtttacgcaatcgagcgcaaata
ttattaaatgaggaaattcccgcaattttatgcggcgattataatgtgatacctcgcgat
gaggatgtatttagcgtgtctgcaatggcaagtgatgcattgatgcagcccgaaagccgc
gccgcatatcggcaatatttgggcgatgggtggagtgatgcctttgtcactaaatatccc
gccggcggtgtgtggacatattgggattatcaggcgggggcatggccgcgcgacaatggt
tttcgcattgatcatttcctgctcagccccatagcggcggacagattggaacatgccgca
gttgataaggaacatcgcggccgtgaaaaggcaagcgatcatgcccctttatgggttcag
cttcgcgattag
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