Sphingorhabdus lutea: LPB140_04710
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Entry
LPB140_04710 CDS
T04602
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00061
Fatty acid biosynthesis
sphl00071
Fatty acid degradation
sphl01100
Metabolic pathways
sphl01212
Fatty acid metabolism
sphl02024
Quorum sensing
sphl04146
Peroxisome
Module
sphl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LPB140_04710
00071 Fatty acid degradation
LPB140_04710
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LPB140_04710
09145 Cellular community - prokaryotes
02024 Quorum sensing
LPB140_04710
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphl01004
]
LPB140_04710
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphl04147
]
LPB140_04710
Enzymes [BR:
sphl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LPB140_04710
Lipid biosynthesis proteins [BR:
sphl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LPB140_04710
Exosome [BR:
sphl04147
]
Exosomal proteins
Exosomal proteins of breast milk
LPB140_04710
Exosomal proteins of breast cancer cells
LPB140_04710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
ARPP-2
Motif
Other DBs
NCBI-ProteinID:
APG62219
UniProt:
A0A1L3JAS7
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All DBs
Position
991953..993644
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AA seq
563 aa
AA seq
DB search
MTNTPQYTKQQYLHPSDWDIAIDEMPLHDVFFRSAGRAPNSYIADFMGRQFTYGDIADKV
RQFAKGLQDLGIGKGSHVGLFLPNVPHYIIAYYGAMAAGATVVNFSPLYTVDELSHQVED
SGTDILVTVSASALLPTALKVLKKSSLKKLIVGNVAECLPLVKSILYRLFKRSEYIAIPK
QDDVKIFASILENKGDYTAHDCDVKNDVALLQYTGGTTGTPKGAMLTHANLSANAAQVNL
LDPRSRINAGENAQEDRILGVLPFFHVFANATVLNRTIMNGGEIVMLPRFDAGQALAAVN
RRHVTSMPGVPTMYQALLDHPNIGKTNFSSLRACISGGAPLAAELKARFESASGAKVIEG
YGLTETSGVVSCNPYEGLNKLGSIGQLIPQTEVRLLDKEDPSKFAPEGEPGELAVKGPQI
MKGYWNRPDADAEIFADGFMRTGDVAARDEDGFYFIVDRIKDMIAVGGFKVFPSQVEDVI
YHHEAVKEALVIGVPDDYRGESPRAYVTLNDGADVDAETLTKWVNAKLGKHERVDKVVIR
DALPKTMIGKLDRKALRAEEGVA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataccccccaatatactaagcagcaatatttacatccaagtgattgggatatc
gcaattgatgaaatgcctttgcatgatgtttttttccgttcggcggggcgcgcgcccaac
agctatattgccgattttatgggccgccaattcacctatggcgatatagcggacaaggtg
cgtcaatttgccaaggggctgcaggatttaggaataggtaagggtagccatgtggggcta
ttcctgcccaatgtgccgcattatattattgcttattatggggcgatggccgcaggtgcg
acggtggtgaatttttcccccctatataccgtggatgaattatcgcatcaggtggaggat
agcggcaccgatattttggtcaccgtgtcggccagtgcattattgcccaccgcgttaaag
gtattgaaaaaatcaagccttaaaaaattgattgtcggcaatgttgctgaatgtctgcct
ttggtaaaatctattctatatcgtttgttcaaacgcagcgaatatatcgccataccaaaa
caggatgatgttaaaatatttgcctctattttggaaaataagggcgattataccgcgcat
gattgcgatgtgaaaaatgacgttgcgctgctgcaatatacgggcgggacaaccggcacg
ccaaagggcgcaatgttaacccatgccaatttatcagcaaatgccgcgcaagtgaattta
ttggacccgcgatcacgcatcaatgcgggtgaaaatgcacaggaagaccgcatattgggc
gttttgccctttttccacgtatttgccaatgcgaccgtgctaaaccgcaccattatgaat
ggcggcgaaattgtcatgttgccgcgttttgacgcggggcaggctttggccgctgtaaac
cgccgtcatgtcacgtctatgccgggcgttcccacaatgtatcaggctttgcttgaccat
cccaatattggaaaaaccaatttcagctcgcttcgcgcctgtatttcgggcggtgcgccc
ttggcggccgagttaaaggcacgttttgaaagcgccagtggggcaaaggtaatagaggga
tatggccttaccgaaacatcgggtgtggtgtcgtgcaatccatatgagggattaaataaa
ttgggcagcattgggcagcttatcccccaaactgaggtgcgtttattggataaagaagac
cccagcaaatttgcacccgaaggagagccgggcgaattggcagttaaaggtccgcaaatt
atgaagggttattggaataggcccgatgccgatgcggaaatatttgccgatggatttatg
cgcacaggcgatgttgccgcgcgcgatgaagatgggttttatttcattgttgaccggata
aaggacatgattgccgttggtgggtttaaggttttccccagtcaggttgaagatgtgatc
taccatcatgaggcagtgaaagaggcgctggtcattggtgtgcccgatgattatcgcggc
gaaagtccgcgtgcctatgtcaccttaaatgacggggcggatgtggatgcagaaacattg
accaaatgggtaaacgccaaattgggtaagcatgaacgggtggataaggtggtcattcgt
gatgcactgcccaaaaccatgattggtaaattggaccgcaaggcacttcgcgcggaagaa
ggcgtggcttaa
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