Sphingorhabdus lutea: LPB140_05235
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Entry
LPB140_05235 CDS
T04602
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB140_05235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphl03019
]
LPB140_05235
03110 Chaperones and folding catalysts [BR:
sphl03110
]
LPB140_05235
03029 Mitochondrial biogenesis [BR:
sphl03029
]
LPB140_05235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphl04147
]
LPB140_05235
Enzymes [BR:
sphl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LPB140_05235
Messenger RNA biogenesis [BR:
sphl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LPB140_05235
Chaperones and folding catalysts [BR:
sphl03110
]
Heat shock proteins
HSP60 / Chaperonin
LPB140_05235
Mitochondrial biogenesis [BR:
sphl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LPB140_05235
Exosome [BR:
sphl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LPB140_05235
Exosomal proteins of other body fluids (saliva and urine)
LPB140_05235
Exosomal proteins of breast cancer cells
LPB140_05235
Exosomal proteins of colorectal cancer cells
LPB140_05235
Exosomal proteins of bladder cancer cells
LPB140_05235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
APG62308
UniProt:
A0A1L3JB08
LinkDB
All DBs
Position
1100977..1102632
Genome browser
AA seq
551 aa
AA seq
DB search
MAAKDVKFGRDARERILRGVDILADAVKVTLGPKGRNVVLDKSYGAPRITKDGVSVAKEI
ELKDKFENMGAQMVREVASKTNDVAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGV
DLAVAKVVENLKGRSKAVAGTNEVAQVGVISANGDTEVGEKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNTEKMLTELDNPYILIHEKKLTNLQPMLPILEAV
VQAGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTKGEM
VSEDLGIKLENVTVGMLGQAKRVTIDKDNTVIVDGAGDAPAIKARVEAIRAQVENTTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGTALL
YATKSLEGLTGANDDQTRGIDIVRRALQAPVRQIATNAGFDGAVVAGKLLEQSDENFGFN
ASTDVYEDLVKSGVIDPTKVVRAALQDAASVAGLLITTEAAVAELPEDKSAPAMPDMGGM
GGMGGMGGMGF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaaatttggccgcgacgcgcgtgaacgcattcttcgcggtgtt
gatattcttgccgatgcggtaaaggtaacattgggaccaaagggccgtaatgttgttttg
gataaaagctatggcgcaccgcgtatcaccaaagatggtgtgtcggttgccaaagaaatc
gaattaaaagataaatttgaaaatatgggcgcacaaatggtgcgtgaagttgcttcaaaa
accaatgatgtcgcaggcgatggcaccaccaccgccaccgttttggcgcaggcaattgtt
cgtgagggcatgaaatctgtcgcagcgggcatgaacccaatggatttgaaacgcggtgtt
gatttggccgttgcaaaggttgttgaaaatctaaaaggtcgttcaaaagcagttgcaggc
accaatgaagtggcgcaagttggcgttatttctgccaatggcgataccgaagtgggtgaa
aaaatcgccgaagccatggaaaaagttggcaaagaaggtgttatcactgttgaggaagca
aagggccttgaatttgaattggatgttgttgaaggcatgcaatttgatcgtggttatttg
tcaccatatttcatcaccaacaccgaaaaaatgctgaccgaactcgacaatccttatatc
cttatccatgagaaaaagctgaccaatttgcagcctatgctccccattttggaagcagta
gtgcaagctggccgtccattgttaatcattgccgaagatattgaaggcgaagcattggcg
acgttggttgttaataaacttcgcggcggtttgaaggttgctgcggtaaaagcacctgga
tttggtgatcgccgtaaagcaatgcttgaagatattgccatccttaccaaaggtgaaatg
gtatctgaagatttgggcattaagcttgaaaatgtaaccgttggcatgttgggtcaggca
aaacgcgttaccattgataaagacaataccgttattgttgatggtgcgggcgatgcgcca
gcaattaaagcacgtgttgaagcaattcgcgcacaggttgaaaataccacttctgattat
gaccgtgagaaattgcaagaacgtcttgccaaattggcaggcggcgttgcagtcattaaa
gttggcggcgcaaccgaagttgaagtgaaagagaaaaaagaccgtgttgacgatgcattg
catgcgacacgcgcggctgttgaagaaggcatcgtccctggcggcggtactgcgcttctt
tatgcgacaaaatctcttgaaggtttgaccggcgcaaatgatgaccaaacacgtggtatc
gacattgttcgccgtgcgcttcaggcaccagttcgccaaatcgcaaccaatgccggtttt
gacggcgcggttgttgctggcaaattattggaacaaagcgatgagaatttcggatttaac
gcatcgaccgatgtgtatgaagatcttgtcaaatcaggcgtgattgacccgaccaaggtt
gttcgtgcagcattgcaagatgccgcttctgttgccggtttgttaatcaccaccgaagct
gccgttgcagaattgcccgaagataaatcagcacctgcaatgcccgatatgggcggcatg
ggcggtatgggcggcatgggcggaatgggcttctaa
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