Sphingorhabdus lutea: LPB140_05515
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Entry
LPB140_05515 CDS
T04602
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00030
Pentose phosphate pathway
sphl01100
Metabolic pathways
sphl01120
Microbial metabolism in diverse environments
sphl01200
Carbon metabolism
Module
sphl_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
LPB140_05515
Enzymes [BR:
sphl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
LPB140_05515
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
APG62345
UniProt:
A0A1L3JB27
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Position
1176206..1178056
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AA seq
616 aa
AA seq
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MTAMHPIVAKVTDRIIKRSSESRQAYLNMIDRAREAGVNRPSLSCGNLAHGFAASGDDKT
AIRGGKALNIGIITAYNDMLSAHQPYGRYPEQIKIFAREKGATAQVAGGVPAMCDGVTQG
QDSMELSLFSRDVIAMSAAVGLSHGMFEGALMLGLCDKIVPGLVIGALRFGHLPTIFIPA
GPMPSGLANREKQRIRQLYAEGKVGREELLEAESASYHGAGTCTFYGTANSNQMMMEMMG
LHMPGASFTNPGSKLRSELTRSAVHRMTEISWEKDGERNGDYRPIGRCIDEKAIVNAIVG
LLATGGSTNHVLHIPAMARAAGINVNWDDIDELSSTVPMLARVYPNGAGDVNYFAAAGGM
PFIIRELVDAGLAHDDILTVYGDGLRAGAKEPMMRDDVLHWDEAPENSGDDSILRGVDNP
FSADGGMRLVKGNLGRATFKNSAVAQDRWTIEAPAAIFDNQHDVVDAFKAGQLERDVVVV
VRFQGPCANGMPELHKLTTPLGVLQERGFRVALVTDGRMSGASGKVPAAIHVSPEAASGG
PLSKLRDGDMVRVCAKHGILEALVADDIWDARDNAPMPAPHDTANMGTGREIFEMMRRFS
DEAEKGGSAMLNVAGL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgactgccatgcatccaatagtcgccaaggtaaccgaccgcatcattaaacggtcaagc
gaaagccgccaagcatatcttaacatgattgaccgcgcccgtgaagcgggggttaatcgg
ccctccttatcatgtggtaatttggcccatggttttgccgccagcggtgatgataaaacc
gcgatacgcggcggtaaggcgttaaatattggtatcatcacagcatataatgatatgttg
tcggcgcaccaaccctatggccgatatcccgaacagataaagatttttgcccgtgaaaag
ggcgcaaccgcacaggtagcgggcggcgttcctgccatgtgtgacggggtgacgcagggg
caggatagtatggaattatcgctgttcagccgcgatgtcattgccatgtcggcggccgtg
gggttaagccatgggatgtttgagggcgcattaatgcttggcctttgcgataaaattgtc
cccggccttgtcattggggcattaagatttgggcatttgccaaccattttcattcccgca
gggccgatgccatcgggtttggcgaatagggaaaaacaacgcatccgccaattatatgcc
gagggtaaggtcggcagggaagaattgttagaggcagaaagcgcatcctatcatggggcg
ggcacatgcacattttatggcacagcgaacagcaaccaaatgatgatggagatgatgggc
ctgcatatgccaggggccagtttcaccaatccaggatcaaaattgcgtagtgaattaacc
cgttcggcagtgcataggatgacagagattagctgggaaaaggatggcgagagaaatggg
gattatcgccccattggccggtgcattgatgaaaaggcgattgtaaacgccattgtcggt
ttattggcaacgggcggttcaaccaaccatgtgctgcatattcccgccatggcgcgcgcg
gcgggcataaatgtgaattgggatgatattgatgagctgtcatccaccgtgcccatgttg
gcgcgggtttaccccaatggcgcgggcgatgtgaattattttgccgccgcagggggcatg
ccctttatcattcgtgaattggtggatgcgggattggcgcatgatgatattttaaccgtt
tatggcgatgggttaagggcaggggcgaaagaacccatgatgcgtgatgatgtccttcat
tgggatgaagcgccagaaaatagcggcgatgacagcattcttcgtggcgtcgacaatcca
tttagcgcggatggcgggatgcgattggtaaaggggaatttgggccgcgccacatttaaa
aatagcgcggtggcacaggatagatggacgattgaggctccggcggccatttttgacaat
caacatgatgttgtcgatgcgtttaaggctgggcaattggaacgtgacgtggtggttgtg
gtgcgttttcaaggaccatgtgccaatggcatgcccgaattgcataagctaaccacgcca
ttgggcgtgcttcaagaacgcgggtttcgggtcgcattggtaactgatggccggatgtcc
ggcgcatcgggcaaagtgccggcggccattcatgtcagcccagaggcggcatcgggcggg
ccattatccaaattgcgcgatggcgatatggtgcgtgtttgcgccaagcatggcatatta
gaagcgttggtggctgatgatatttgggacgcacgcgacaatgcgccaatgcccgcgccg
catgatacagccaatatgggcacggggcgcgaaatatttgaaatgatgcgccggtttagt
gatgaagcagaaaaaggcgggtctgccatgttgaatgtggctggtttataa
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