Sphingorhabdus lutea: LPB140_05850
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Entry
LPB140_05850 CDS
T04602
Name
(GenBank) DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB140_05850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_05850
Enzymes [BR:
sphl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LPB140_05850
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPB140_05850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
APG62397
UniProt:
A0A1L3JB83
LinkDB
All DBs
Position
complement(1236461..1237084)
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AA seq
207 aa
AA seq
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MGISSEIIKSSLDELALHDKVLANLIQQFGYPEGRIRPTGYQSLLRTIVGQQVSVAAAAS
VWNKLENLLGENCPAENLITKDFEELRACGLSRQKQGYARSLAELILTGALDLDNLSPDD
EQAISQLTSVKGIGRWSAEIYLLFAEGRPNIWPAGDLAIQEAVKRIKGLDERPNEKETRL
HGDDWHPHRGAAATFCWHVYNKNFEAI
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgggcatttcttctgaaattattaaatcatctttggatgagcttgccctgcatgataaa
gtgctggccaatttaattcagcaattcggctatccagaagggcggattcgtccgacgggc
tatcaatccctactgcgcaccattgtcggccaacaagtcagcgtggccgccgccgcatca
gtatggaataaattggaaaatttattaggcgaaaattgccccgccgaaaatttaataaca
aaggattttgaagaacttcgcgcatgcgggcttagccgccaaaaacaaggatatgcacga
tcattggccgagttaattttaacaggtgcgctggatttggacaatttgtcacccgatgat
gaacaggccatatcgcaattaaccagcgtaaaaggcattggccgctggtcggcagaaatt
tatctgttatttgcagaaggacgacccaatatctggcccgcaggcgatttggcgattcaa
gaagcggtaaaacggattaagggattggatgaacgtcccaatgaaaaagaaacgcgccta
catggcgatgattggcacccgcatcgcggcgcggcggcgacattttgctggcatgtttat
aataaaaatttcgaagctatttaa
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