Sphingorhabdus lutea: LPB140_06265
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Entry
LPB140_06265 CDS
T04602
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sphl
Sphingorhabdus lutea
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphl03016
]
LPB140_06265
Enzymes [BR:
sphl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LPB140_06265
Transfer RNA biogenesis [BR:
sphl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB140_06265
Prokaryotic type
LPB140_06265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
APG62458
UniProt:
A0A1L3JBG7
LinkDB
All DBs
Position
complement(1328421..1329164)
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AA seq
247 aa
AA seq
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MTRFALTIEFDGRPYMGWQHQNHGPSVQQAIEEAIEAVTQEKVRIQAAGRTDSGVHALAM
RAHADIEKPLSAFRLGEAINAKLKGHPIAIISCEQVADDWHARFSCIGRAYIYHIVNRRA
PLTLQSGRAWQIAHPLDSDAMHDAAQILLGLHDFTTFRSTICQSKSPIKTLDQLDVVRSG
DDIKIYAGARSFLHHQVRSMVGCLAAVGSGRWTKDDLQSALEAKDRQRLAINAPPDGLYF
VKAIYPE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaccagatttgccctgaccatcgaatttgatggccgcccctatatggggtggcaacac
caaaatcatggcccatcggtgcaacaggcgattgaagaagcaattgaagccgttacccag
gaaaaagtccgcatccaagcggctggccgcacagatagcggggttcacgcattggcaatg
cgcgcccatgccgatattgaaaagcccttatccgcctttcgattgggcgaggcgataaat
gcaaaattaaagggacatcccatcgccattatttcctgtgaacaggtggcggatgattgg
catgcgcgtttttcctgtattggacgcgcctatatttaccatattgttaatcgccgtgcg
ccattaaccctgcaaagcgggcgggcatggcaaatcgcgcatccgttggacagcgatgca
atgcatgatgcggcgcaaatattattgggcctgcatgactttaccacatttcgttcaacc
atatgccaatcaaaaagcccgattaaaacattggatcaattggatgtcgtgcgcagcggt
gatgatataaaaatatatgccggtgcgcggtcatttttgcatcatcaggtgcggtcaatg
gtgggatgtttggcggcggtcggatctggccgatggacaaaggatgacctgcaatccgcg
ctggaggcaaaggataggcaaaggctggccataaatgccccgcccgacggattatatttt
gtaaaggctatttatcccgaataa
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