Sphingorhabdus lutea: LPB140_06950
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Entry
LPB140_06950 CDS
T04602
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sphl
Sphingorhabdus lutea
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphl02000
]
LPB140_06950
Transporters [BR:
sphl02000
]
Other transporters
Pores ion channels [TC:
1
]
LPB140_06950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
APG62566
UniProt:
A0A1L3JBQ6
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All DBs
Position
complement(1460909..1462921)
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AA seq
670 aa
AA seq
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MKKQSISRAAIACALLSYSSITYAFEAENYEGIDEGNTIIVTGNTPLNEAEMRANKVAGG
TDIVGHDDYADKSLTSLRDALSFSPGIYLQPRYGQEVRISIRGSGLSRGFHMRGLTLLQD
GVPINLADDNGDFQELEPIFFDHLEVYRGANALRFGSGTLGGAINGVTPTGQSAEGLYLR
GDIGSFNSYRGLASFGTSNENGDIWAAISKDSADGDRDHAKRDSLRFHGNVGLNISSNIK
SRFYVSFNNINQQLPGALNYNDALTSPKKGNFTGNQARDIDSIRLQNRTSIDFGSTKLDV
GLFLNSKSLFHPIYQVIDQESFDRGAFFRLDHENGPFEITLGGEARFGEVNSKRFINIDG
ERSTPTFQADQKAKTANIYGEIRYSPSEKLNFITGGIFATGTRQQQENYNSFAGGERNVF
AKADFNEFSPKFGILYQINPNISFYANYSKSAEFPGFIELAQISQFVPIKAQTAWTKEIG
SRGSMGAFTWDITAYQADIKGEILQFTIGTDIPASTFNAGKTRHMGIEAALTIEPTNWLR
LRQIYQYNDFKFKNDAQYGDNRLPVIPRHVYRAEIRLGNEKAHIAPNIEWVPVGAFADYN
NAVKVPSYAILGMTAGFNILPNIDLFFDARNLNKKKAIGDISAVITATAASIIYQPTEQR
AIFGGFRARF
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaatcaatctcccgcgcggcaattgcctgcgccctattatcctattcttcc
atcacctatgcatttgaagccgaaaattatgaaggcattgatgaaggcaatacaatcatt
gtaaccggtaataccccattaaatgaagcagaaatgcgcgcaaataaggttgctggcggc
accgatattgtcggacatgatgactatgccgacaaatcccttacctctttacgcgatgcc
ttatccttttctccagggatatatttacagccgcgctatggtcaggaagtacgcatatct
ataagaggatcaggccttagccgcggatttcacatgcgcggcctgaccctattgcaagat
ggtgttcctataaatttggcggacgataatggcgattttcaggagttagagccgatattt
ttcgaccatttagaagtatatagaggagcaaatgcgctgcgttttggttctggcactttg
ggcggtgcaataaatggtgtaacccccactgggcaaagcgccgagggactttatttacgc
ggcgatattggcagttttaatagctatagagggctggcctcttttggtacaagcaatgag
aatggcgacatttgggccgcgattagcaaggacagcgccgacggcgatcgcgatcatgcc
aaaagagatagcctgcgtttccacggcaatgttgggcttaatatctcatccaatattaaa
agcaggttttacgtaagttttaacaatatcaatcaacaattgcccggcgcgttaaattat
aatgatgctctaacatcccccaaaaaagggaattttaccggcaaccaggcacgtgatata
gatagtataagactgcaaaaccgcaccagcatagattttggatcaacaaaattggatgtc
gggctgtttttaaacagtaaatccctattccaccccatttaccaagttattgaccaggaa
tcatttgatcgcggcgccttttttcgactggaccatgaaaatggcccctttgaaattaca
ttaggtggtgaagcaagatttggagaagttaattccaaaagatttatcaatatagatggc
gaacgcagcacgccgacttttcaggctgaccaaaaggcaaaaaccgccaatatatatggt
gagataagatattccccatccgaaaagcttaattttataactggcggcatttttgccacc
ggcacacgtcagcaacaggaaaattataatagctttgccggcggagaaagaaatgtcttc
gcaaaggcagactttaatgagttttcacccaaatttggcattttatatcaaataaacccc
aatatttcattttacgcaaattatagcaaatctgcagaattccctggatttatcgagctg
gcccagattagccaatttgtgccgattaaggcgcaaaccgcatggaccaaagaaattggc
agcagaggaagcatgggcgcgttcacatgggacattaccgcatatcaggccgatattaag
ggagagatattacaattcaccattggcacagatatacccgcatcgacatttaatgctggc
aaaacccgtcatatgggcattgaagctgcgctaaccatagagccgacaaattggctgcgc
ctgcgtcaaatatatcaatataatgattttaagttcaaaaatgatgcccaatatggggat
aaccgcctgcccgttatcccgcgacatgtctatcgtgcggagataaggttgggcaatgaa
aaggcccatattgcgccaaatattgaatgggtgcccgtgggggcatttgctgattataat
aatgcagtaaaagtgcccagctatgccattttgggcatgaccgctggttttaacatattg
ccaaatatcgatttatttttcgatgcccgcaatttgaacaagaaaaaagcgattggcgat
ataagcgcggtcatcacggcaactgccgcctccattatctatcaaccaaccgaacaacgc
gccatttttggcggttttcgcgcacgtttttaa
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