Allosphingorhabdus lutea: LPB140_07415
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Entry
LPB140_07415 CDS
T04602
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphl
Allosphingorhabdus lutea
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphl03032
]
LPB140_07415
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_07415
Enzymes [BR:
sphl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LPB140_07415
DNA replication proteins [BR:
sphl03032
]
Prokaryotic type
DNA Topoisomerases
LPB140_07415
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LPB140_07415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
DUF1936
Motif
Other DBs
NCBI-ProteinID:
APG62645
UniProt:
A0A1L3JBX7
LinkDB
All DBs
Position
1563295..1565931
Genome browser
AA seq
878 aa
AA seq
DB search
MNLVVVESPAKAKTIEKYLGKGYKVLASFGHVRDLPPKDGSVDPADGFAMKWQNYGDKAK
QLKAISDASKASDRLILATDPDREGEAISWHVLEVLKKKKLLPAKVERVTFNAITKAAVT
EAMANPRDLDHDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLIVERE
REIEAFKSLEYWSVLANMEHKGQEFVARLVTLDGQKLDKHGLNNEKSAMAAKSLVENANL
RVASVETKPAKRHPQPPFMTSTLQQEAARKLGFAASHTMRVAQGLYEAGAITYMRTDGVT
MDGSAISEARRAITNRYDGAYIPEKPRVYKSKAKNAQEAHEAIRPTDFNDDRFGSGDQAK
LYDLIYKRALASQMSSVNLERTAIMLEDGTGNLGLRANGQVIVFPGFLALYEEGLDDNEQ
EDGGLLPAMVNGDTPAKKNVEANQHFTQPPARFSEATLVKRLEELGIGRPSTYASTIQVL
KDRSYVRVEKNRFFSEDSGRLLTAFLERFFEQYVAYEFTAALEDELDEISGGRLGWQQVL
EQFWKDFETITASVMEQKPSDITAELDKFLAPYLFPEKEDGSNPRLCPKCGVGELSLRGG
RFGAFIACSDYPECKFTRQFAQAGGGNADDSQDGDLGEHPETGEMISRKTGRFGPFVQMG
EGKEAKRASVPKDIPADEFDFDWAVKLLSLPRLVGIHPESGEEVRAAIGRYGPYLIHDGK
YAKLDGTRDVFDVGMNAAVVKLAEAAENKGGRGRAKAEPLKIYGPHPESGSELKLMDGRY
GPYITDGSVNATVPRGQDGNDFTLDDAAALIDAKIAKGPAKKKKAAPKKKAATKKPAAKK
TAVKKPATKKAVTKKPAAKKTAAKKSATKKTDVIKAAE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagtcgtcgtagaatcgccagcaaaagcaaagaccatcgaaaaatatctgggc
aaggggtataaggtattagcatcctttggccatgttcgggatttgccgccaaaagatggg
tcggttgatccagcagatggctttgcaatgaaatggcaaaattatggcgataaggccaag
caattaaaagcgattagcgatgcttcaaaggcttctgatcgattgatacttgccaccgac
cctgatcgggagggtgaggcgattagctggcatgttttagaagtgttgaaaaagaagaaa
ttactccctgcaaaggttgagcgtgtcacatttaacgctatcacaaaggctgctgtcacc
gaagccatggccaatccacgtgatttggaccatgatttaatcgatgcctatcgtgcacgc
cgcgcattggattatttggttggctttaccttatcacctgttttgtggcgtaaattgccc
ggtgcaaaatctgcgggccgcgttcaatcggttgcgctgcgtttaattgttgagcgggaa
cgagagattgaggcgtttaagtcgctggaatattggtctgtcttggcaaatatggagcat
aagggccaagaatttgtggcgcgtcttgttactttagatggccaaaaattggacaagcat
gggctgaataatgaaaaatcggcaatggcggcaaaatcattggttgaaaatgccaatttg
cgcgtggcgtctgtggagacaaaaccggccaaacgccacccacaaccgccatttatgaca
tcaactttgcagcaggaggctgcacgaaaattaggattcgccgccagccatacgatgcgc
gttgcacaaggtttatatgaagcgggcgcgattacatatatgcggaccgatggtgtaacc
atggatggcagcgccatttcggaggcgcgccgcgccataaccaatcgctatgatggggca
tatattcctgaaaaaccaagggtttataaaagcaaggccaaaaatgcgcaagaggcgcat
gaggcaatccgtcccacagattttaatgatgaccgatttggtagcggtgatcaggcaaaa
ttatatgatttaatttacaaacgcgcattggccagccaaatgtcatcggtaaatttggaa
cgcacagccattatgttagaagatggcaccggcaatttagggctgcgtgccaatggccaa
gttatcgtttttccaggatttttggccctttatgaagagggattggacgataatgagcag
gaagatggcggtttattacccgcaatggtgaatggcgatacgcctgcgaaaaaaaatgtc
gaggctaatcaacatttcacccagccacctgcgcgattttcagaagcaactttggtcaaa
agattggaagaattgggcattggacgtccgtcaacctatgcctccaccattcaggtgtta
aaagatagatcatatgtccgtgttgagaaaaaccgttttttctcggaagatagcggcagg
ttgttaacagcatttctagaaaggttcttcgaacaatatgtggcatatgaatttaccgcc
gctttggaggatgagcttgatgagataagcggcgggcggcttggatggcagcaagttttg
gagcaattttggaaagattttgaaaccattaccgccagtgtgatggaacaaaaaccatcc
gatattacggcagagcttgataaatttttggccccatatttatttccggaaaaagaagat
gggtcaaacccgcgtctatgtccaaaatgcggggttggtgaattgtccttgcgcggtggg
cgtttcggcgcatttatcgcttgttctgattatcctgaatgtaaatttacgcgccaattc
gcgcaggctggcggcggcaacgctgatgatagccaagatggtgatttgggtgaacatccc
gaaaccggagagatgataagccgaaaaacgggccggttcggtccttttgttcaaatgggt
gagggtaaagaggcaaaacgtgcatctgtgccaaaggatattcctgccgatgaatttgat
tttgattgggcagtgaaattactatctttgccgcgtttggtgggcatccatccagaaagc
ggcgaagaagtgcgggcggccattggacgctatggcccatatttaatccatgatggtaaa
tatgcgaaattggatggaacaagagatgtttttgatgtcggcatgaatgccgctgttgtt
aaattggcggaggccgctgagaataagggcgggcgtggccgtgcaaaggcagagcctttg
aaaatttatggaccgcatcccgaaagtggcagtgagttaaaattaatggacggtcgttac
ggaccatatatcaccgatggaagcgtgaatgccaccgttccgcgcggacaagatggtaat
gatttcacattggatgatgctgccgccttaattgatgcgaaaattgccaaggggccagca
aaaaagaaaaaagccgccccgaaaaagaaagctgcaaccaaaaagcccgcagcgaagaaa
acagcggtaaaaaaaccagcaacgaagaaagcagtgaccaaaaaaccagcagcgaagaaa
acagcggcaaaaaaatctgcgaccaaaaaaacggacgttataaaagctgctgaataa
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