Sphingorhabdus lutea: LPB140_07925
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Entry
LPB140_07925 CDS
T04602
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sphl
Sphingorhabdus lutea
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphl03032
]
LPB140_07925
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_07925
Enzymes [BR:
sphl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LPB140_07925
DNA replication proteins [BR:
sphl03032
]
Prokaryotic type
DNA Topoisomerases
LPB140_07925
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LPB140_07925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
APG62728
UniProt:
A0A1L3JC77
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All DBs
Position
1668023..1670803
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AA seq
926 aa
AA seq
DB search
MTDIENGSIDPSDISAIDIVDEMKSSYLDYAMSVIVSRALPDVRDGLKPVHRRILYASQE
GGFVAGKPYRKSAKIVGDVMGNYHPHGDSAIYMALARMTQNWAMRVPLVDGQGNFGSMDP
DMPASMRYTEARLAKVTNSLLNDLDKDTVDFAPNYDGSLKEPVVLPARFPNLLVNGAGGI
AVGMATNIPPHNLGEVIRACLAYMDNPAITTDELIEIIPGPDFPTAPLILGQGGAKAAYR
EGKGSVMMRSRHIIESGRNDRQSIVLTSIPYQVGKSGLVEKIAEAVKDKRIEGVSAIRDE
SNRNGVRVVIDLRKDATPDVVLNQIWRFTPAQSSFPVNMLAIRGGRPEILMLRDIIEAFI
KFREEVITRRTKFELNKARERAHILLGLVVAVTNMDEIVRIIRGSASPAEARASLLARTW
PIEQIASYIKLVEAVEIDTSPDGYKLSDVQVRAILELRLHRLTALGRDDIGNELKELAVK
IAEYLEILGNRVRLYEVMREELVEIEQEFATPRLCEIAPAWDGLDDEDLMEREEMVVTVT
HGGYIKRTPLDTFRAQNRGGKGRAGMATKDEDAIIEMFVTSTHTPVLFFSTHGKVYRLKV
WKLPEGGPQTRGRPMVNLLPLADGESISTVLPLPEDENEWANLNVMFATANGQARRNSMG
AFTNIPSNGKFAMRFDDDSDDHLIGVALLNDDDDVLLATQKGKAIRFAGSAIREFQSRTS
SGVRAMKLKGDDKVISLSILRGAGTTMEERDEYLKYAPWKAEKEGEPNLTAEKYQSMEEN
EQFILTLCANGYGKISSAYEYRQSGRGGQGVTNIDNIARNGDVVASFAATKDDQLMLVTD
QAKLIRMPLNSLRVIGRSSSGVRLFNVGKNEHVVSAARIEEDDMADDENMEGENVETANA
DATQIEAAPDTKEAQNSEASNGDEAE
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacatagaaaatgggtcaatagacccctctgatattagtgcgattgacattgtc
gatgaaatgaaatccagttatttggattatgccatgtcggtcattgtttcacgcgcattg
cccgatgttcgtgatggattaaagccggtgcatcgccgtattttatatgccagccaagaa
ggcggctttgtggcgggcaaaccctatcgtaaatcggcgaaaattgtcggggacgtgatg
ggtaattatcacccacatggtgatagcgcgatttacatggccttggcacggatgacccaa
aattgggcgatgcgtgtaccattggttgatggtcaaggtaattttggttctatggaccct
gacatgcctgcctccatgcgatatacagaggcccgattggccaaggttaccaacagcctg
cttaatgatttggataaggatacggttgattttgcgcccaattatgacggttcattaaaa
gaacctgttgttctacctgcgcgttttccaaatttattggtcaatggcgcaggcggcatt
gcggtgggcatggccaccaatattccgccgcataatttgggcgaagttattcgtgcctgt
cttgcctatatggataatcccgccattacgaccgatgagttgattgaaattattcccggg
cctgattttcccaccgcgcccttaattttgggtcaaggcggcgcaaaggccgcatatcgg
gagggcaagggttcggtcatgatgcggtcgcgccatattattgaatctggacgtaatgat
cgccaatcaattgttttaacatcaataccctatcaagttggtaaatccgggcttgtcgaa
aaaatcgctgaggcagttaaggataaaaggattgaaggcgtgtcggccattcgcgatgaa
tcaaatcgtaatggtgttcgcgttgtaattgacctgcgcaaggacgcaacgcccgatgtt
gtgttaaaccaaatttggcgctttacccctgcccaatccagcttccccgtcaacatgctt
gccattcgcggtggccgccccgaaattttgatgctgcgtgatattattgaggcatttatt
aaatttcgtgaggaggttattacccgccgcaccaaatttgaattaaataaagcgcgggag
cgagcacatattttgcttggcctagtcgttgccgtcaccaatatggacgaaattgtgcga
attattcgcggctcggccagcccggcggaggcgcgcgcttcattattggcgcgcacatgg
ccgattgaacaaattgcatcctatattaaattggttgaggctgtagaaattgacacttca
cccgatggatataaattatcggatgttcaggttagagcgattttggagctacgcctgcac
cgtttaaccgcgcttggccgcgatgatattggcaatgaattaaaagaattggccgtaaaa
attgccgaatatttggaaattctgggcaatagagtgcgtttatatgaagtgatgcgcgaa
gaattggtcgaaattgaacaagaatttgcgacccctcgcctttgtgaaatcgcccctgca
tgggatggtttggatgacgaagatttgatggaacgcgaagaaatggtcgtcaccgtcacc
catggcggatatattaaacggacgccgcttgatactttccgcgcccaaaatcgtggtggc
aagggacgtgctggcatggcaacaaaggatgaggacgccattattgaaatgttcgtcaca
tccacgcacacgccggttttattcttctccacccatggtaaggtttatcgtttaaaagta
tggaaattgcctgaaggcggcccgcaaacaaggggacgtccgatggtcaacctgctcccc
ttggccgacggagaatcaatttcaaccgttcttcccttgccagaggatgaaaatgaatgg
gccaatttaaatgtcatgtttgcaaccgcaaatggacaggcacgccgtaacagcatgggc
gcatttaccaatatcccatccaatggtaaatttgcgatgcgatttgatgatgatagcgat
gatcacttaattggcgttgcattattaaatgatgatgatgatgttttattggccacccaa
aagggtaaggccatccgttttgccggttcagcgattagagaatttcaaagcagaacatca
tcgggcgttcgtgcaatgaaattaaaaggcgatgataaggttatttcattatccattctt
cgcggtgctggcaccacaatggaagaacgcgatgaatatttaaaatatgcaccgtggaag
gccgagaaagagggtgagcccaatttaacagccgaaaaatatcaaagtatggaggaaaat
gaacaatttatcctgacactttgtgccaatggttatggcaaaatatcctctgcatatgaa
tatcgccaaagcggccgtggcggtcaaggcgtcaccaatattgataatattgcgcgtaat
ggcgatgtggtggccagctttgccgcaacaaaggatgatcaattaatgttggtaactgat
caggcaaaattaatccgcatgccgttaaacagtttgcgtgttattgggcgcagctcatct
ggcgtacggttatttaatgttggtaaaaatgaacatgtggtcagcgcagcacgtattgaa
gaagatgacatggccgatgatgaaaatatggaaggcgaaaatgtagaaacagcaaatgca
gatgccacacaaatagaggccgcgcccgatactaaagaggcgcaaaatagcgaagcatca
aatggtgatgaggcggaataa
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