Sphingorhabdus lutea: LPB140_08520
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Entry
LPB140_08520 CDS
T04602
Name
(GenBank) RNase adaptor protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
sphl
Sphingorhabdus lutea
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphl03019
]
LPB140_08520
Messenger RNA biogenesis [BR:
sphl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LPB140_08520
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_33
Rad17
Zeta_toxin
AAA_16
AAA_29
AAA_18
T2SSE
ABC_tran
AAA_27
AAA_28
Herpes_Helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
APG62826
UniProt:
A0A1L3JCG8
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All DBs
Position
1801569..1802516
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AA seq
315 aa
AA seq
DB search
MSQENNKKHPKKARKILLVTGLSGAGKSTTVKTLEDLGWEIVDNFPITLIHALLETPLPH
DQVDLQKPLAIGFDSRTRGYNPSLLIEQVKALQENGAYDIMTLFLDCSGNEIERRYTETR
RPHPLAKDRPTIDGIAQDRQLMEPLRRWAETLIDTSRLSTNDLQIEIRERFSLNQQMGLS
LTITSFGFARGVPHNADLIFDMRFLQNPHWVDELRPLTGLDNKIAEYVSSDKNFDKIYNQ
MSQMLSDLLPLYAAQGKAHVNIAFGCTGGRHRSVFVAEKFAKLFEEKGYSPTIIHRNLAS
RSIDALEGNPGQVQY
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagaaaataataaaaagcacccaaaaaaggcccgaaaaatattattggtgacg
ggactatctggcgccggcaaatcaaccaccgttaaaactttagaagatttagggtgggaa
attgttgataattttcccattactttaatccatgctttattggaaaccccccttccccat
gatcaagttgatttgcaaaaaccacttgcaattggatttgacagcagaacaagaggatat
aatcccagcctgttaattgaacaggtaaaggcgttacaggaaaatggcgcttatgacatt
atgaccttatttcttgattgttctggaaatgaaattgagcgccgatacaccgaaacaagg
cggccgcatccgcttgccaaggaccggccaacaattgacggcatcgcacaggacaggcaa
ttgatggagccattgcgcagatgggccgaaaccttaattgacacaagccggctgagcacg
aatgatttacaaatcgaaattcgtgagagattttccctaaaccaacaaatggggttaagc
ctgacgattaccagttttggatttgcgcgcggcgttccgcacaatgccgatttaatattc
gacatgcgttttttacaaaatccccattgggttgacgaattgcgccctttaaccgggctt
gacaataaaattgccgaatatgtcagttcggataaaaatttcgacaaaatttataatcaa
atgtctcaaatgctttctgacttattgccattatatgccgcgcagggcaaagcgcatgtt
aatattgcatttgggtgcaccggcggacggcatcgttcggtctttgtggcggaaaaattt
gcaaaattatttgaagaaaaagggtattccccaacgattattcaccgcaatttggcatca
agatcaattgatgcgttggaaggtaatcctggacaagtgcaatattga
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