Sphingorhabdus lutea: LPB140_08625
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Entry
LPB140_08625 CDS
T04602
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LPB140_08625
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphl01007
]
LPB140_08625
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphl03016
]
LPB140_08625
03029 Mitochondrial biogenesis [BR:
sphl03029
]
LPB140_08625
Enzymes [BR:
sphl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LPB140_08625
Amino acid related enzymes [BR:
sphl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LPB140_08625
Transfer RNA biogenesis [BR:
sphl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LPB140_08625
Prokaryotic type
Other AARSs
LPB140_08625
Mitochondrial biogenesis [BR:
sphl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LPB140_08625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
APG62844
UniProt:
A0A1L3JCJ3
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All DBs
Position
complement(1826674..1828458)
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AA seq
594 aa
AA seq
DB search
MHAYRTHNCSQLRQENVGDTVKLSGWIHRKRDHGGVLFIDLRDHYGVTQILADSDSKAFA
QMDSLRSESVICITGRVIARDAEAKNDRLPTGAIEVYVDEIQILSAAEELPMPVFGDAEY
PEDIRLRYRFLDLRRENVHANMMLRSSVISSLRRRMTEQNFTEIQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MSFVTQDDVFNAIEPVLAGVFEEFANGKSVTPAGEFVRIPYKTAMLKYGSDKPDLRNPIE
ISDVSEHFKGSGFGLFDKIVAGGGVVRAIPAPNTVEKSRKFFDDMNDWARGEGHAGLGYV
TRKGGEFGGPIAKNHGEEGMKALYAELGLGDDDGCFFAAGKEGQAAKLAGAARTRIGEQL
ELIEQNCFKFCWIVDFPMFEYDEENKKIDFSHNPFSMPQGEMDALENMDPLDILAWQYDI
VCNGVELSSGAIRNHRPDIMYKAFEIAGYSKEEVDANFSGMINAFKFGAPPHGGSAPGVD
RIVMLLADEPNIREVVVFPMNQKAEDLMMGAPNLPTAKQMRELHLRVIEPPKKA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcatatcgcacccataattgttcccaattgcgccaagaaaatgttggcgataca
gtaaaattatctggttggatccaccgtaaacgcgaccatggcggcgttttattcatcgat
ttacgcgaccattatggcgtgacgcaaattttggcagacagcgacagcaaggcatttgcc
caaatggatagcctgcgcagcgaatctgttatctgtattacgggccgtgtgattgcgcgt
gatgcagaggcgaaaaatgatcgcctgcccacaggcgcgattgaagtttatgtcgatgaa
atacaaattttgtcagcagccgaagaattgcctatgccggtatttggcgatgcggaatat
cccgaagatatccgtctgcgttaccgtttccttgatttgcgccgtgaaaatgttcacgcc
aatatgatgttgcgttcatcggttatttcgtctttgcgccgccgcatgacggagcaaaat
ttcactgaaattcaaacaccgattctaaccgcgtcgtcaccagagggggcgcgtgattat
cttgtccccagccgtgtgcatccgggtaaattttacgccctgccgcaggcaccgcaaatg
tttaaacaattattgatggtggccggatttgaccgttatttccaaatcgcaccttgtttt
cgcgatgaagatgcgcgcgcagaccgcagcccaggtgagttttaccagcttgactttgaa
atgagttttgtcacccaagatgatgtgtttaacgcgattgagcctgttttggccggagtt
ttcgaagaatttgccaatggcaaaagcgtgacgccagcaggtgaatttgtgcgtatcccc
tataaaaccgcgatgttgaaatatggcagtgataagcctgatttgcgaaacccgattgaa
atttccgatgtgagcgaacattttaaaggatcaggatttggcttatttgacaaaatcgtt
gctggcggcggtgttgttcgcgccatccccgcaccaaatactgttgaaaaaagccgtaaa
ttctttgacgatatgaatgattgggcgcgtggggaaggtcatgctggccttggctatgtc
acgcgcaagggcggcgagtttggcgggcctatcgctaaaaatcatggcgaagagggtatg
aaggcgctttatgccgaacttggccttggcgatgatgatggttgtttctttgccgcaggt
aaagaaggccaggccgcgaaattggccggtgctgcgcgaacccgaattggcgagcaattg
gagcttatcgaacaaaattgctttaaattttgctggattgtcgatttcccaatgtttgaa
tatgatgaggaaaataagaaaattgatttcagccacaacccattttcaatgccgcagggc
gaaatggatgcgcttgaaaatatggacccgctcgacattttggcatggcaatatgatatt
gtttgtaatggcgtggagctttcttcgggggcaattcgtaaccaccgcccagatattatg
tataaagcatttgaaattgccggatatagtaaggaagaggtggacgccaatttctctggc
atgattaacgcgttcaaatttggcgcaccaccgcatggtggctcggcgcccggtgttgac
cgtattgtgatgttattggctgatgaacccaatatccgcgaagtagtggtgttcccgatg
aaccaaaaggcagaggatttgatgatgggtgcgcccaacctgcccacggcaaaacaaatg
cgtgaattgcatttgcgggtgattgagccgccaaaaaaggcataa
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