Sphingorhabdus lutea: LPB140_08765
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Entry
LPB140_08765 CDS
T04602
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00260
Glycine, serine and threonine metabolism
sphl00460
Cyanoamino acid metabolism
sphl00630
Glyoxylate and dicarboxylate metabolism
sphl00670
One carbon pool by folate
sphl00680
Methane metabolism
sphl01100
Metabolic pathways
sphl01110
Biosynthesis of secondary metabolites
sphl01120
Microbial metabolism in diverse environments
sphl01200
Carbon metabolism
sphl01230
Biosynthesis of amino acids
sphl01240
Biosynthesis of cofactors
sphl04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LPB140_08765 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LPB140_08765 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LPB140_08765 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LPB140_08765 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LPB140_08765 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LPB140_08765 (glyA)
Enzymes [BR:
sphl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LPB140_08765 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
APG62866
UniProt:
A0A1L3JCL2
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Position
1855219..1856526
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AA seq
435 aa
AA seq
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MSDNNQHDMIRKNGFFTEDLAQADQAVMSAIGKELTREQKQIELIASENIVSKAVLQAQG
SVFTNKYAEGYPGKRYYQGCAPSDDVEQLAIDRAKQLFDCEYINVQPHSGAQANGAVMLA
LVKPGETILGMSLDAGGHLTHGARPAMSGKWFNAVQYGVRSDNHLIDYDEVEKLALEHKP
KLIIAGGSAYPRIIDFVRFREIADKVGAYLHVDMAHFAGLVAAGLHPSPLPHAHVVTTTT
HKTLRGPRGGMILSNDPDLGKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKSYSA
AVIKNAQALAERLRERGAALVSGGTDTHLALVDLTPLGVTGKDADEALERAGITCNKNGI
PNDPLPPTKTSGIRVGSPAGTTRGFGVEEFQQIGDMIADVLDGLRNKGEEGDAAVEADVK
KRVEALCAKFPIYPS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataataaccaacatgatatgatccgcaaaaatggtttctttaccgaagatttg
gcacaggctgatcaagccgtcatgtccgcaatcggcaaggaattaacccgcgaacaaaaa
caaattgagttaattgcatcggaaaatatcgtctccaaagctgttttacaggcacaaggt
tcggtctttaccaataaatatgccgaaggttatcctggcaaaagatattatcaaggatgc
gcaccatccgatgatgtcgaacaattggctattgaccgtgcaaaacaattatttgattgt
gaatatatcaatgtgcaaccacatagcggcgcacaggccaatggcgcggtgatgttggca
ttggtcaaaccgggcgaaacaattttggggatgagcctggacgcgggcgggcatttaacc
catggcgcgcgccctgcaatgtcgggcaaatggtttaacgccgtgcaatatggcgtgcgc
agcgacaatcatttaattgattatgatgaggttgaaaaactggcgctggaacataaacca
aaattaataattgccggtggctccgcctatccgcgcattattgattttgttcgtttccgt
gaaattgccgataaggttggcgcatatttgcatgtggatatggcccattttgccggattg
gttgcggcgggtctgcacccatcgcccctgcctcatgctcatgtggtgaccaccacaacc
cataaaacattgcgcggcccgcgtggcggcatgattttgtcaaatgatccagatttgggc
aagaaattcaacagtgcggttttccccggacttcagggtggcccattaatgcatgttatc
gcggcaaaggcggttgcatttggagaggcgctacagcctgaatttaaatcatatagtgca
gccgtgattaaaaatgcccaagcattggcagagcggcttcgtgagcgcggcgcggcactt
gtttccggcggcacagacacgcatttggcgcttgttgacctgacaccattgggcgtaact
ggcaaggatgcggatgaggcattggaaagagccggcattacttgcaataaaaatggcatt
cccaatgatcccctgccccccacaaaaacaagcggtattcgcgttggttcaccagcgggc
acaacgcgcggctttggcgttgaggaatttcaacaaattggtgatatgattgccgatgtg
ttggacggcctgcgcaataagggtgaggaaggtgacgcagcggtcgaggccgatgtcaaa
aaacgcgttgaggcattatgcgcaaaatttccaatttatccttcttga
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