Sphingorhabdus lutea: LPB140_09005
Help
Entry
LPB140_09005 CDS
T04602
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sphl
Sphingorhabdus lutea
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphl03016
]
LPB140_09005
Enzymes [BR:
sphl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LPB140_09005
Transfer RNA biogenesis [BR:
sphl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB140_09005
Prokaryotic type
LPB140_09005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
APG62904
UniProt:
A0A1L3JCQ3
LinkDB
All DBs
Position
complement(1899940..1900860)
Genome browser
AA seq
306 aa
AA seq
DB search
MLSGWVILDKPLGMGSTQMVSAVKRNLREAGLMGKLRDGPKVGHGGTLDPLATGVLPIAI
GEATKLCGHMLDAAKCYDFTICFGTETSGLDAEGEVVKTSDFRPLLSQIEQILPNFTGPI
EQIPPAFSAIKIDGKRAYALAREGKAVEMKSRSVKIYSLKILAFERNPDEGLSSVTISAK
VSKGTYIRSLARDISYAVESVGHVTMLRRTKSGPFTLDQAISLDKLNKLGQGLDPQDIIL
PFEIGLVDIPALYLSSQAAIAIKHGRVLAEIIEGDGLYCCKDAENRPLALIEITGGEPKI
VRGFNL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcttagtggatgggttattctggataaaccactaggcatgggatcaacccaaatggtc
agcgcggtgaaacgcaatttacgcgaagctgggttgatgggcaaattacgcgatggccca
aaggtggggcatggcgggacgctagaccctttggccacgggggtgctgcccattgccatt
ggggaggcgaccaaattatgcggacatatgttggatgcggccaaatgctatgatttcacc
atttgttttggcacagagaccagtgggctggatgcagagggcgaggtagttaaaacatcc
gactttcgcccattattaagtcaaatagagcaaatattgccaaactttactggcccgatt
gagcaaataccgcctgctttttctgcgattaaaattgatgggaaacgcgcctatgccttg
gcacgggagggcaaggcagtggagatgaaaagccggtctgtgaagatatatagcctcaaa
atattggcttttgagcggaatccagatgaaggtttatcctcggtcaccatctctgccaaa
gtatcaaagggcacctatattcgttctttggcgcgtgatatttcctatgcggtggagagt
gtgggtcatgtcaccatgttgcggcgcaccaaatctggtcctttcacattggatcaggcg
atttcactggacaaattgaacaaattaggccaagggctggacccacaggacataatattg
ccgtttgagattgggctggtcgacatcccggctctatatctctcttcgcaggcggcgatt
gcgatcaaacatggtcgtgtcttggcggagataattgagggcgatggtttatattgttgc
aaggatgccgagaatcggcctttagcattgatagaaattaccggcggtgagccgaaaatt
gtccgaggttttaatttataa
DBGET
integrated database retrieval system
