Sphingorhabdus lutea: LPB140_09890
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Entry
LPB140_09890 CDS
T04602
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sphl
Sphingorhabdus lutea
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphl03016
]
LPB140_09890
Enzymes [BR:
sphl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LPB140_09890
Transfer RNA biogenesis [BR:
sphl03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LPB140_09890
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
APG63770
UniProt:
A0A1L3JF73
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All DBs
Position
2084605..2085894
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AA seq
429 aa
AA seq
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MNVYDGERMTEMFAGQGMVQVENGKEADLVVLNTCHIREKAAEKVYSDIGRLRRKDGSSP
MIAVAGCVAQAEGKEISKRAPSVDIVVGPQAYHRLPDMVAHAQSGKRSVDTDMPAISKFD
IMPPRTKQPRPTAFLTVQEGCDKFCTYCVVPYTRGAEISRPWADLINEAKALVDGGVSEI
TLLGQNVNAWTGEDEKGQMHGLDGLIRALDKIDGLKRIRYTTSHPNDMTDALINAHGEIE
SLMPYLHLPVQAGSDRILKAMNRSHSRDSYLHILDKMRKVRPDIALSGDFIVGFPGETDQ
DFADTLSLVKQVRYAQAYSFKYSPRPGTPAAIMDNQIAPEIMDERLQALQALLNEHQHDF
NKQSVGRTASILFERTGKLDGQLIGKSPWLQSVHVIAPGLKIGDLADVKLVDSGPNSLTG
ELINILDKE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtatatgatggcgaacgcatgaccgaaatgtttgccggtcaaggtatggtgcag
gtagaaaatggtaaagaagccgatttggttgttttaaacacatgccatatccgtgaaaag
gcggcggaaaaagtatattccgatattggccgtttgcgccgtaaagatggttcatccccc
atgattgctgtcgctggatgtgtggcacaggccgagggcaaggaaatcagtaagcgcgcg
ccatcagttgatattgtggtcgggccacaggcatatcaccgcctgcccgatatggttgcc
catgcgcaaagcggcaaacgcagcgtggataccgatatgcccgcaattagcaaatttgac
atcatgccgccgcgcaccaaacaaccgcgccccaccgcatttttaaccgtgcaagagggc
tgtgacaaattttgcacctattgcgttgttccctatacacgcggggccgaaatctctcgc
ccatgggcggatttaatcaatgaagcaaaagcattggtcgatggcggagtttccgaaatt
accttattgggtcaaaatgttaacgcatggacaggcgaagatgaaaaaggccaaatgcat
ggattggacggtttaattcgtgcattggacaagattgatggccttaaacggataagatat
accaccagccaccccaatgacatgaccgatgcgttaatcaacgcgcatggcgaaattgaa
tctttaatgccatatttgcatttgcccgttcaggcaggttcggaccggatattaaaggcg
atgaaccgcagccatagccgtgattcctacctacatatattggacaaaatgcgtaaagtg
cgccccgacattgccctttcgggcgactttattgtcggtttccccggcgaaacggaccaa
gattttgccgatactttaagccttgtcaaacaggtgagatatgcgcaggcatattcattt
aaatattcaccgcgccccggcacaccggccgcgataatggacaatcaaatcgcgcctgaa
attatggatgaacgactgcaggccttgcaggcattgttaaatgagcatcaacatgatttt
aacaaacaaagcgtgggacgaacggcaagcatattatttgaacgcaccggaaaattggac
gggcagttaattggtaaatcaccatggctgcaatcggttcatgtcattgccccgggcctt
aaaattggtgatttggccgatgtaaaattggtggatagcgggccaaacagcctgacaggt
gagttaattaacatattggataaggaataa
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