Sphingorhabdus lutea: LPB140_10095
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Entry
LPB140_10095 CDS
T04602
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sphl
Sphingorhabdus lutea
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_10095
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LPB140_10095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
RecA
DnaB_C
AAA_16
AAA_22
AAA
nSTAND3
DUF7125
NACHT
NTPase_1
GvpD_P-loop
AAA_5
Lon_C
AAA_24
AAA_30
CbiA
AAA_29
SLFN-g3_helicase
AAA_14
AAA_11
ABC_tran
bpMoxR
NPHP3_N
Rad51
DUF7129
Zeta_toxin
DAP3
AAA_19
MCM
Motif
Other DBs
NCBI-ProteinID:
APG63077
UniProt:
A0A1L3JD40
LinkDB
All DBs
Position
complement(2133609..2134967)
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AA seq
452 aa
AA seq
DB search
MAKVKKKYICSQCGSISNRWQGQCDDCGEWNSIVEEAPVTIFAQKHDLSAGGRLVSLSGL
DSDIAIPERMKIGMEELDRAIGGGLVAGSATLVAGDPGIGKSTLLLQACAALARQGKNCV
YISGEEAVDQVRLRARRLGLADAPVQLASATSVRDILTTLRGGNIPDLLIIDSVQTMHSD
LIEGAPGTVSQVRASSQELIRFAKENGCALLLVGHVTKDGNIAGPRVLEHMVDTVLSFEG
ERSHQYRIMRAVKNRFGGTDEIGVFAMQEGGLVEVANPSTLFLTDRDSAISGAAIFPALE
GTRPVLVEIQALTVRLSSGATPRRSVVGWDSARLAMILAILEARCGLSFANVEVYLNVAG
GYKISDTAADMAVAAALVSAFSERPLPVASIIFGELSLSGEVRPVSHSNIRLKEAAKLGF
DAAWVPAKADAGKKMDMRYFATLGELTRHMLQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggtaaagaaaaaatatatttgttcgcaatgcggatccatcagcaatcggtgg
caggggcaatgtgatgattgcggcgaatggaacagcatcgttgaagaagcgcccgtcaca
atatttgcccaaaaacatgatttaagcgcgggggggcggcttgtctccctttccggattg
gatagcgatattgccatacccgaacgcatgaaaattggtatggaggaattggaccgggcc
attggcggcggattggtggcgggttcggccacgttggtcgcgggtgatccaggcattggc
aaatctaccctattgttacaggcatgtgctgcattggcgcgtcagggtaaaaattgcgtt
tatatttccggcgaggaagcggtggatcaggtgcggttgcgcgcacgcaggcttggcctt
gccgatgcgccggttcagctggcctctgcgacatcggtgcgcgatattttaacaacattg
cgcggggggaatattcccgatttattgattatagattcggtgcaaaccatgcatagcgat
ttgatagagggtgcacccggcacggtcagccaggtgcgggcatcgtcacaggaacttatc
cgtttcgccaaggaaaatggatgcgctttattattggtggggcatgtgacaaaggatggc
aatattgccggcccgcgtgttttggagcatatggttgacacggtgctgtcttttgaaggg
gaaagaagccatcaatatcgcattatgcgcgcggtgaaaaaccgttttggcggcactgat
gaaattggcgtttttgcgatgcaagagggcggattggtagaggttgccaaccccagcaca
ttatttttgacagacagagatagcgccatttcgggcgcggccatttttcccgcattggag
gggacacgccccgttttagtggaaattcaggcattgaccgtgcgattatcatccggcgca
acgccgcgccgttcggtggtggggtgggacagcgcccgattggcgatgattttggcaata
ttggaggcacgatgcgggttaagttttgccaatgtcgaggtatatttgaacgtcgcgggc
gggtataaaatttccgacacagcggcagatatggcggtggcggctgctttggtttcggca
tttagtgaacggccattgcccgtggcctccatcatttttggtgaattgtcattatcgggc
gaggtgcggcccgtttcccacagcaatattcggctgaaagaggcggcaaaattgggtttt
gatgcggcatgggttccagcaaaagccgatgcgggcaagaaaatggacatgcgatatttt
gccacattgggcgaattaacgcggcatatgttgcaatag
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