Sphingorhabdus lutea: LPB140_10855
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Entry
LPB140_10855 CDS
T04602
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00061
Fatty acid biosynthesis
sphl00071
Fatty acid degradation
sphl01100
Metabolic pathways
sphl01212
Fatty acid metabolism
sphl02024
Quorum sensing
sphl04146
Peroxisome
Module
sphl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LPB140_10855
00071 Fatty acid degradation
LPB140_10855
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LPB140_10855
09145 Cellular community - prokaryotes
02024 Quorum sensing
LPB140_10855
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphl01004
]
LPB140_10855
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphl04147
]
LPB140_10855
Enzymes [BR:
sphl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LPB140_10855
Lipid biosynthesis proteins [BR:
sphl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LPB140_10855
Exosome [BR:
sphl04147
]
Exosomal proteins
Exosomal proteins of breast milk
LPB140_10855
Exosomal proteins of breast cancer cells
LPB140_10855
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
APG63804
UniProt:
A0A1L3JFA7
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All DBs
Position
complement(2281982..2283781)
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AA seq
599 aa
AA seq
DB search
MNKFPNVLEMFFDRAERKGDAPFLWAKNNFDKKSNEWQSISWRQAAQMVSGLARNLRKMG
LKKGDRVMLVSENRPEWCISDLGIMAAGCITVPTYVTNTQRDHQHIIENSGARAIIISTN
KLISTILPAALHGNDTEFVIAIEPYKSAQRGSVKFLDWSDLAVGSDDDVVKIRADIQSIG
RDDTACIIYTSGTGGAPRGVMQHHGSILHNARGAALILDEDFGLGDEVFLSFLPLSHAYE
HSGGQFLPTSVGAQIYYAEGLEKLAANIEETRPTIMVVVPRLFEVLRQRMIKTVEKQGKL
ANGLLSRALNIGEREYDGKKRFRDLPMKLLLSRTIKPKIRAKFGGRMKAMVSGGAPLNPD
IGVFFDSLGLTLLQGYGQTEAGPVISCNRPRAGIKMDTVGPPLADTEVIIADDGEILVRG
ELVMHGYWRNQAETDRVLKDGWLHTGDIGHIDGAGRIVITDRKKDLIVNDKGDNVAPQKV
EGMLTLQPEIMQAMVHGDKRPYIVGLIVPDPEWALEWARAQGKKYDFNQLQCNPEFRAAI
RAAVDRVNVDLSVTEKVRRFEFTEEPFSIENKEQTPSMKIRRHVIRDRYQSLLDGMYKA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaatttccaaatgtattggaaatgttttttgaccgtgcagaacgtaagggcgat
gccccatttttatgggcaaagaataattttgataaaaaatcaaatgagtggcaatccatt
tcatggcgacaggccgcgcaaatggtgtctggccttgccagaaatcttcgtaaaatgggc
ctgaaaaagggcgatcgggtcatgttggtttcggaaaaccggcccgaatggtgcatttcg
gatttgggcattatggcggcggggtgcattaccgtgccaacctatgtcaccaatacacag
cgcgaccaccaacatattattgaaaatagcggcgcccgcgccatcattatttcaaccaat
aagttaatttccactatattacctgcggcattgcatggcaatgataccgaatttgttatc
gcaatcgaaccctataaatctgcgcaaaggggatcggttaaatttttggactggtccgat
ttggctgtgggcagcgatgatgatgtggtgaaaataagggcggatattcaatccattggc
cgcgatgacaccgcatgtatcatttataccagcggcacgggcggtgcgccgcgcggggtg
atgcaacatcatggttcaatattgcataatgcgcgcggggcggcgttaatattggatgag
gattttggtctgggggatgaggtatttttatccttcctaccacttagccatgcatatgag
catagtggcgggcagtttttacccactagcgtgggcgcacaaatttattatgctgagggg
ttggagaaattagccgccaatattgaggaaactcgcccgacaatcatggttgttgtaccc
cgattatttgaggtattgcgccaacggatgattaaaacggtggaaaaacagggcaagctg
gccaatggcttgttaagccgtgcgcttaatattggggagcgcgaatatgatggaaaaaaa
cgtttccgtgatctgccgatgaaattattgttgagccggacgataaaaccgaaaatccgt
gccaaatttggtggtcggatgaaggcgatggtatctggcggtgcgccattaaaccccgat
attggggtgttttttgactcgcttggtttaactttattacaaggatatggccagacagag
gctgggccggtgataagttgcaatcgcccccgtgcaggcattaaaatggacactgtcggc
ccgccattggccgataccgaagttatcatcgccgatgatggtgaaattttggtgcgcggc
gaattggtgatgcatggatattggcgtaatcaagccgaaaccgaccgtgtgttaaaggac
gggtggctgcacactggagatattggccatattgatggtgcagggcgcattgtgattacc
gaccggaaaaaggatttaatagtcaatgataagggtgataatgtcgccccgcaaaaggtg
gagggcatgttgactctgcaaccggaaatcatgcaggcaatggtgcatggcgacaaacgc
ccctatattgtcgggttgattgtgcctgatccggaatgggcattggaatgggcaagggcg
cagggcaaaaaatatgattttaatcaattgcaatgcaatccggaatttcgcgctgccatc
cgcgcagcggtggaccgggtgaatgtcgatttatcggtcactgaaaaagtgcgcaggttt
gaatttaccgaagaaccattttccattgaaaataaagaacaaacgccgtctatgaaaatc
cgccggcatgtcattcgtgatcgctatcaatcattattagatggcatgtataaggcgtga
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