Sphingorhabdus lutea: LPB140_11160
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Entry
LPB140_11160 CDS
T04602
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00071
Fatty acid degradation
sphl00280
Valine, leucine and isoleucine degradation
sphl00310
Lysine degradation
sphl00362
Benzoate degradation
sphl00380
Tryptophan metabolism
sphl00410
beta-Alanine metabolism
sphl00640
Propanoate metabolism
sphl00650
Butanoate metabolism
sphl00907
Pinene, camphor and geraniol degradation
sphl00930
Caprolactam degradation
sphl01100
Metabolic pathways
sphl01110
Biosynthesis of secondary metabolites
sphl01120
Microbial metabolism in diverse environments
sphl01200
Carbon metabolism
sphl01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LPB140_11160
00650 Butanoate metabolism
LPB140_11160
09103 Lipid metabolism
00071 Fatty acid degradation
LPB140_11160
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LPB140_11160
00310 Lysine degradation
LPB140_11160
00380 Tryptophan metabolism
LPB140_11160
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LPB140_11160
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LPB140_11160
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LPB140_11160
00930 Caprolactam degradation
LPB140_11160
Enzymes [BR:
sphl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LPB140_11160
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LPB140_11160
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LPB140_11160
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
2-Hacid_dh_C
Sacchrp_dh_NADP
AlaDh_PNT_C
Shikimate_DH
DAO
DUF1433
DUF2680
Motif
Other DBs
NCBI-ProteinID:
APG63252
UniProt:
A0A1L3JDP9
LinkDB
All DBs
Position
complement(2349133..2351325)
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AA seq
730 aa
AA seq
DB search
MTYKCFTVEIDSDGIALLTLDVPNNSMNVWNADLIAEFPKFVDEVLSNDEIKGAVITSGK
ASGFMAGADLNMLGSSKAASMGEAFENAFGLNATLRKMETGGNKAKDMLKGTAFAKPFAC
ALNGLALGGGLELALACHYRVAADNPKIQLGLPEVMVGLLPGGGGTQRVPRLIGLQNAAM
MIVQGKSLNPATAKAQGLIHDVVPEADLIAKAKEWVKANPKTLAPWDAKGFKFPGGAGAM
DPRSVQLFVGLNAIAHKESKGNYEAVKAILSCLYEGSILPMDTALRVESKYFTKLLSGPQ
AKNMIRTLFVNKQAAEKGAGRPAGVPKVDLKKVGVLGGGLMGSGITHVTAKGGMDVVVLD
RSMEDAQKAVAYSQKIMDKAVARGKMTKEKADAFMARITPTDNYDDLKDVDLIIEAVFER
PDVKADVIKKAEAVIGKDVVFASNTSTLPITGLAKNSSRPEQFVGLHFFSPVEKMPLLEI
IPGEQTGDLAMAVAFDYNAKIRKTPIVVKDVRGFFTNRVFPPYMGEAMLLVSEGVKPALI
ENVAKNMGMPIGPLALLDETTLQLGYDVMQSTKQELGADYRPSGTEDFLEKMVVELGRKG
RRFGSGFYDYDDKGERKGLWAGMADHYPIADPQPSAEEVKQRLLYIQLIATAQCFDEGVV
PDPQSADLGAIFGWGFMPYTGGPISYIDTIGVENFVRTADNMAQKYGERFKPPVSFRKKA
EEKGTFYKAA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacatataaatgttttacagttgaaatagacagcgacggtatcgctttattaactttg
gatgtgccaaataatagcatgaatgtgtggaatgcggatttaattgccgaattcccaaaa
tttgtcgacgaagtgttaagcaatgacgaaattaagggcgcggtcattacctctggcaag
gccagcggatttatggcaggggccgaccttaacatgttgggcagcagcaaagccgccagc
atgggcgaggcgtttgaaaatgcattcggactgaacgccaccctgcgaaaaatggaaacc
ggcggcaataaagccaaggatatgttgaaaggcaccgcctttgccaagccatttgcgtgc
gcgttaaacggccttgcccttggtggcgggttggaattggcacttgcatgtcattaccgc
gtggcggccgacaatccaaaaattcagcttggcctgcccgaggtaatggttggcctactt
cccggtggcggcggaacacagcgtgtgccgcgccttatcggtttgcaaaatgccgcgatg
atgattgtgcagggcaaatcattaaaccccgcaactgcaaaggcccagggccttatccat
gatgttgtgccagaggcggatttaatcgccaaggcgaaagagtgggtaaaggcgaacccc
aaaacccttgccccatgggatgccaaaggatttaaattccccggcggcgcgggcgcgatg
gacccacgttcggtgcaattatttgttggattaaacgcgattgcccataaagaaagcaag
ggtaattatgaagcggtaaaggcgattttatcctgcctttatgaaggctctatcctgccc
atggataccgcattgcgcgtggaatcaaaatatttcaccaaattattgtccggaccacag
gcaaaaaatatgatccgcactttatttgtcaataaacaggcagcagaaaagggcgcgggc
cgtccagcgggcgtgccaaaggttgatttgaaaaaagtcggcgtccttggcggcgggtta
atgggttcaggcattacccatgtcaccgcaaagggcggcatggatgtggtggttttggac
cgcagcatggaagacgcgcaaaaggccgtcgcctattcacaaaaaattatggataaggcg
gtcgcacgcggcaaaatgaccaaggaaaaggccgatgcctttatggcgcggattacccca
acagataattatgacgatttaaaagatgttgatttaattattgaggcagtgtttgaacgc
cccgatgtaaaggctgatgtgattaaaaaggccgaggctgttatcggcaaagacgtggtt
tttgcgtccaacacctccacccttcctatcactggacttgccaaaaattcatcacggccc
gaacaatttgtcggcctgcatttcttctcacctgttgaaaaaatgcctttgttggaaatt
attcctggcgagcaaacgggcgatttggcgatggccgtggcatttgattataatgccaaa
attcgcaaaaccccgattgtggtaaaagatgttcgtggtttcttcaccaaccgcgtattc
ccgccatatatgggtgaggcgatgctgttggttagcgaaggggtaaaacccgccttaatc
gaaaatgtcgccaaaaatatgggcatgcccattggtccattggcgctgctggatgaaacc
acattacagcttggctatgatgtgatgcaatcgaccaagcaagagcttggcgcggattat
cgcccatcaggaacagaggatttccttgaaaaaatggtggtggaattgggccgtaagggc
cgccgctttggttcaggattttatgattatgatgataagggagagcgtaagggcctgtgg
gccggaatggcggaccattatccgattgccgatccacagccaagcgcagaggaggtgaag
cagcgcctgctttacatccaacttatcgccaccgcgcaatgttttgatgaaggcgttgtt
cccgatccgcaaagcgcggatttgggcgcgattttcggttggggctttatgccatatacg
ggcggcccgattagctatattgacacaattggcgtggaaaattttgtccgcaccgccgat
aatatggcccaaaaatatggcgaacgctttaagcctccggtcagtttccgtaaaaaggcc
gaagaaaaaggcacattttataaggctgcttaa
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