Sphingorhabdus lutea: LPB140_11210
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Entry
LPB140_11210 CDS
T04602
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB140_11210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_11210
Enzymes [BR:
sphl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LPB140_11210
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LPB140_11210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
APG63258
UniProt:
A0A1L3JDP2
LinkDB
All DBs
Position
complement(2360564..2361358)
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AA seq
264 aa
AA seq
DB search
MTQKIQIASWNINSIRARIELVEKFLIEYQPDILCLQETKVVDDLFPSAPFRMLGYNHQA
LHGQPMHHGVAILSKLPLRDIRRHDWQQNGEARHVGASLANGMRVENVYVPAGGDIPDAE
ENPKFGQKLNFINQMIAWSQDVETPTILTGDFNIAPLEHDVWSHKQLANVVSHTQIEIDL
LNKLQGTGNWVDLARHFTPAEEKLYTWWSYRARDYAASNRGRRLDHMWVTPNLLEKAASH
QVHVTCRGWAKPSDHVPIVTTFSL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaaaatacaaatcgcatcttggaatattaactcaattcgcgcccgaattgaa
ttggttgaaaaattccttatcgaatatcaacccgatattttatgccttcaagaaaccaag
gtggtggacgatcttttcccatctgcgccatttcgcatgttgggatataatcatcaggca
ttgcacggccaacctatgcaccatggcgttgccattttaagcaagctgccgctgcgcgat
atacggcgccatgattggcaacaaaatggggaggcgcggcatgttggcgcatccttggcc
aatggaatgcgcgttgaaaatgtatatgttccggcgggcggtgatattcccgatgcggag
gaaaatccaaaatttgggcaaaaattaaatttcatcaatcaaatgattgcatggtcacag
gatgtggaaacccccactattttgactggggatttcaacatcgccccattggagcatgat
gtgtggagccacaaacaacttgccaatgtggtcagtcatacacaaattgaaattgattta
ttaaataaattacaaggcacaggaaattgggtggatttggcgcggcattttaccccggcg
gaggaaaaattatacacatggtggagttaccgtgcgcgtgattatgccgcatccaaccgt
ggccgccgattggatcatatgtgggtaacgcccaatttattagaaaaagcggctagtcat
caggtgcatgtaacatgccgtggatgggccaaaccgtctgaccatgtgcccattgtcacc
acattttcgctatag
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