Sphingorhabdus lutea: LPB140_11415
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Entry
LPB140_11415 CDS
T04602
Name
(GenBank) TonB-dependent receptor
KO
K16090
catecholate siderophore receptor
Organism
sphl
Sphingorhabdus lutea
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphl02000
]
LPB140_11415
Transporters [BR:
sphl02000
]
Other transporters
Pores ion channels [TC:
1
]
LPB140_11415
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CBM46
Motif
Other DBs
NCBI-ProteinID:
APG63826
UniProt:
A0A1L3JFC5
LinkDB
All DBs
Position
complement(2411565..2413685)
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AA seq
706 aa
AA seq
DB search
MTLSKATYSLLISSSAIGAAMMAATPAFAAVSAAANYDDAEPIIVTGKTDGYVTKETVSA
TKTNTAVKDVPQSITVFNEEQIEDQAIQELGDVLRYVPGVSVGQGEGHRDQITLRGQNTT
ADFFVDGLRDDIQYFRPIYNVERVEVLKGPNAMIFGRGGGGGVVNRVIKTPQEGDSFGDA
TLSVDSFGAFSISTDANFASGENEAVRFNGIYEEFNNHRDEYNGRRIAVNPSYAAHLGES
TRLLLAYEFVHDRRVTDRGIPSLNNEPIDGYYDAFFGEEGVNDTTLKMHNFKARLEHEFN
DNVEVNITSQYTDYDKFYRNVYARSATATTVELDSYDNGTKRQNFVTQANLIWNSNIGAL
DHILLVGAEYGNQQSVSERSNGYWPSTNSTRLTLPISGFATGTATLPEILFPTVTSASDS
DAEFFGAYVQSQLKFGDLVELVGGVRYDRFELSTVNRINNFAASRNDDKFSPRIGLIVKP
TQQISLYSSYAKSFLPQSGDQFSVLDASTSSLAPESFTNYELGMKWDIASDLAFTAAIYQ
LDRTNTRASDPLNPALIVLTGETRTKGFETQLSGNITPNWQASLAYSYQEGEIRSTTTSA
PAGRLLAQLPKHQFAAWTRYDVSDNFGFGLGLTHQSSQFASISNTTKLPSYTRVDAALYH
DLSEDVQVQLNVENLFDAEYFPSAHNDNNISTGEPFNVRATIKFGF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaccctctccaaagccacttattccttgttaatttcatccagcgcgattggcgcggca
atgatggcggcgacccctgcatttgcagcggttagcgcggcagcaaattatgatgatgcc
gaacccattatcgtcaccggtaaaaccgatggctatgtaaccaaggaaactgtgtcggcc
accaaaaccaatacagcggtgaaggatgtgccacaaagcatcaccgtttttaatgaagaa
caaattgaagatcaggcaattcaggaattgggtgatgtgctgcgttatgtccctggtgtt
tcggttggccaaggtgaggggcatcgcgaccaaattactttgcgcggacaaaataccacc
gccgatttctttgttgatggattgcgcgatgatattcaatatttccgccccatttataat
gttgagcgggttgaggtgttaaaaggcccaaatgcgatgatttttggccgtggcggcggc
ggcggcgtggttaaccgcgttatcaaaaccccgcaagaaggagacagctttggcgatgca
acgcttagcgtggatagttttggcgcattttcgattagcacagatgccaatttcgccagc
ggtgaaaatgaagcggtgcgtttcaacggtatttatgaagaatttaataatcatcgcgat
gaatataatggccgccgtattgccgtaaacccaagctatgccgcgcatttgggcgaaagc
acaagattgttattggcatatgaatttgttcatgaccgccgcgttaccgatcgcggtatc
ccgtcattaaataatgaaccaattgatggatattatgacgcatttttcggcgaagaaggt
gttaatgacacaacattaaaaatgcataatttcaaggcccgcttggagcatgaatttaac
gataatgtagaggtaaatattacttcgcaatatacagattatgacaaattttacagaaat
gtatatgcccgcagcgcaaccgcgacaactgtggagctggattcatatgataatggcacc
aaacgtcaaaatttcgtgacccaagctaatttaatctggaattcaaatattggcgcattg
gaccatattttattggtgggcgcagaatatggcaatcaacaaagcgttagtgagcgtagc
aatggttattggcccagcacaaattccacccgtttgacattgccaatttctggatttgca
acaggcaccgccacattgccggaaattttatttcctacggtgaccagcgccagtgattcc
gatgctgaatttttcggtgcctatgtgcaatcacaattaaaatttggtgatttggtcgaa
ttggttggcggtgttcgttatgatcgttttgagctatccaccgttaaccggatcaataat
tttgctgcatcacgcaatgatgataaattttcaccgcgtatcggcttaatcgtgaaacca
acacagcaaatttcattatatagcagctatgcaaaatcatttttgccgcaatcgggcgac
caattttctgttttggatgccagcacaagcagcctagctccggaaagcttcaccaattat
gagcttggcatgaaatgggatattgcaagcgatcttgcctttaccgcagcaatttatcaa
ttggaccgcaccaatacacgcgcatccgacccattaaatcctgcattgatagtgttgacg
ggtgaaacccggaccaagggttttgaaacacaattatcgggcaatattaccccaaattgg
caggcaagccttgcctatagctatcaagaaggcgaaattcgcagcaccaccacatcggcg
cccgccggtcgtttgcttgcccaattaccaaaacatcaatttgccgcatggacacgttat
gatgtgagcgataatttcggttttggtcttggcttaacgcatcaatcatcgcaatttgcc
tctatctccaataccaccaaattgccgtcatatacacgtgttgatgctgcgctttaccat
gatttgagcgaagatgttcaggtgcaattaaatgtggaaaatttgttcgatgccgaatat
ttcccctctgcgcataatgataataatatctccacaggtgaaccatttaatgtgcgggcg
accattaaatttggattttaa
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