KEGG   Sphingomonas sp. MM-1: G432_00865
Entry
G432_00865        CDS       T02498                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
sphm  Sphingomonas sp. MM-1
Pathway
sphm02024  Quorum sensing
sphm03060  Protein export
sphm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    G432_00865
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    G432_00865
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    G432_00865
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphm02044]
    G432_00865
Enzymes [BR:sphm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     G432_00865
Secretion system [BR:sphm02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   G432_00865
  Eukaryotic Sec-SRP protein
   G432_00865
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_33 AAA_22 AAA_31 AAA_16 ABC_tran ResIII AAA_19 APS_kinase Thymidylate_kin AAA_30 AAA_24 ArsA_ATPase MMR_HSR1 YqeC DnaB_C AAA_17 AAA AAA_14 eRF1_3 cobW AAA_5 NACHT AAA_28 NB-ARC DO-GTPase1 nSTAND3 6PF2K KTI12 NPHP3_N
Other DBs
NCBI-ProteinID: AGH47901
LinkDB
Position
177294..178763
AA seq 489 aa
MAMFESLSERLGGVFDRLRGRGALNEADVRAAMREVRIALLEADVALPVVREFVDKATEK
AVGQQVLKSVTPGQQVVKIVNDALVEMLGAEASDLDIDVTPPAVVMMVGLQGSGKTTTTA
KIAKRLTEKGRKKVLMASLDVNRPAAQEQLATLGAQASVATLPIVAGQQPVDIAKRALQA
AKLQGFDVVMLDTAGRLHVDQALMEEMKAVAEVSAPHEILLVVDSLTGQDAVNVAKSFSE
QVQLTGVVLTRMDGDARGGAALSMRAVTGKPIKFAGTGEKLDGLEPFQPARVAGRILGMG
DVVSLVEKAAETIKVEEAEALAAKMAKGLFDMNDLRAQLNQMKRMGGLGALAGMLPGVKQ
VKQAMSSGAVDDKILVRMDAMISSMTPKERTKPEIINAKRKIRIAKGSGTTVQEVNKLLK
MHQEMSTAMKKIRKMGGLKGLGALLGKGGLGGGLGGLMGGGGGMPQLPPGGLPGLGGALP
PGFDKFGKK
NT seq 1470 nt   +upstreamnt  +downstreamnt
gtggcgatgttcgaaagtctgagcgaacggcttggcggcgttttcgaccgtctgcgcggc
cgtggcgcgctgaacgaggcggatgtccgcgcggccatgcgcgaggtccgcatcgccctg
ctcgaggcggacgtggcgctcccggtcgtccgcgagttcgtcgacaaggcgaccgagaag
gccgtcggccagcaggtcctgaaatcggtgacgccgggccagcaggtcgtgaagatcgtc
aacgatgcgctggtcgagatgctgggtgccgaggcatcggacctcgatatcgatgtcacg
ccacctgccgtcgtcatgatggtcggcctgcaaggctcgggcaagacgaccacgacggcc
aagatcgccaagcggctcaccgaaaagggccgcaagaaggtgctcatggcatcgctggac
gtcaatcgcccggccgcccaggaacagctcgccacgctcggcgcccaggcgtccgtcgcc
accttgccgatcgtcgccggccagcagccggtcgatatcgcgaagcgggcgctccaggcc
gcgaagctccagggcttcgacgtggtgatgctcgacaccgccggccgcctccacgtcgat
caggcgctgatggaggagatgaaggcggtcgccgaggtttcggccccgcatgaaatcctg
ctcgtcgtcgactcgctgaccggccaggacgccgtcaacgtcgccaagagcttctcggaa
caggtgcagctcaccggcgtggtgctcacccggatggacggcgatgcccgtggcggcgcc
gcgctgtcgatgcgcgccgtcaccggcaagccgatcaagttcgccggcaccggcgagaag
ctcgacgggctggagccgttccagcccgcgcgtgtcgccggccgcatcctcggcatgggc
gatgtcgtcagcctcgtcgaaaaggcggcggagacgatcaaggtcgaggaggccgaggcg
ctcgccgccaagatggccaagggcctgttcgacatgaacgacctgcgcgcccagctcaac
cagatgaagcgcatgggcggcctcggcgcgctcgccggcatgttgccgggcgtcaagcag
gtgaagcaggcgatgtcctccggcgccgtcgacgacaagatcctcgtccgcatggatgcg
atgatctcgtcgatgacgcccaaggagcgcaccaagccggaaatcatcaacgccaagcgc
aagatccgcatcgccaagggcagcggcaccaccgtgcaggaagtgaacaagctcctgaag
atgcatcaggaaatgtccaccgcgatgaagaagatccgcaagatgggcggcctcaagggt
ctgggcgccctccttggcaagggggggctgggcggcggcctcggcggattgatgggcggc
ggcggcggtatgccgcagcttccgcccggcggcctgcccggcctcggcggggcgctcccg
cccggcttcgacaaattcggcaagaaataa

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