Sphingomonas sp. MM-1: G432_01040
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Entry
G432_01040 CDS
T02498
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphm
Sphingomonas sp. MM-1
Pathway
sphm00061
Fatty acid biosynthesis
sphm00071
Fatty acid degradation
sphm01100
Metabolic pathways
sphm01212
Fatty acid metabolism
sphm02024
Quorum sensing
sphm04146
Peroxisome
Module
sphm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
G432_01040
00071 Fatty acid degradation
G432_01040
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
G432_01040
09145 Cellular community - prokaryotes
02024 Quorum sensing
G432_01040
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphm01004
]
G432_01040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphm04147
]
G432_01040
Enzymes [BR:
sphm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
G432_01040
Lipid biosynthesis proteins [BR:
sphm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
G432_01040
Exosome [BR:
sphm04147
]
Exosomal proteins
Exosomal proteins of breast milk
G432_01040
Exosomal proteins of breast cancer cells
G432_01040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
YqaJ
Motif
Other DBs
NCBI-ProteinID:
AGH47936
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All DBs
Position
215908..217539
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AA seq
543 aa
AA seq
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MGPVIRPRLLTQLLDDAVAAWPERRAIDFLGRTWRYDEIGALVSRAARGLQDLGLKPGDR
FGLCLPNTPYYVILYFAALRVGAIVVNFNPLYVERELDHQIRDSGTRMMAVPDVKVVHEK
VAAVAEGTGLEKIIVCPMADILPPLQSWGFRLFKRRDHAVIPADGRHVGFRALVVRDAAP
DPVAQSPDDVAVLQYTGGTTGVPKGAMLTHANLTANSAQMLAHVGGVRAVQERTLGVLPM
FHVFALTTVLNFSVEIAAEMILLPRFEMDQVLATMKRTRPTQFFGVPTIYVAMNGVPDGK
LPDMSAIRACISGGAPLPLDVREAFEKRTGVRVVEGYGLSEASPIIACNPIEGLVKDNSC
GPRFPGTVLEIRDPAEPSRLMPLGERGEVCARGPQVMKGYWQRPDETEACFADGALRTGD
IGYLDEDGYLFLVDRIKDVILAGGYNVYPRVIEDAAYHHPAIKEAVAIGVFDKYRGQSPK
LFVALREDMTATEEEIRAFLADRISKIEMPKYIEIRDALPKTLIGKLSKKELVEEEKARR
SVS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtggggcctgtcatccgtccccggctccttacccagttgctcgacgatgccgtggcggcc
tggcccgaacggcgcgcgatcgacttcctcgggcgcacctggcgctatgacgagatcggc
gcgctggtcagtcgcgccgcgcggggattgcaggatctcgggctgaagccgggcgaccgc
ttcggtctctgcctgcccaatacgccttactacgtcatcctctatttcgcggcgctgcgc
gtcggcgcgatcgtcgtcaacttcaacccgctctatgtggagcgcgagctggatcaccag
atccgcgattccggcacgcggatgatggccgtgccggacgtgaaggtggtgcacgaaaag
gtcgccgccgtcgccgagggcacggggctggaaaagatcatcgtctgcccgatggcggat
atcctgccgccgctccagtcctggggtttccggctgttcaagcggcgcgaccatgccgtc
atcccggcggacggccgccatgtcggcttccgcgccctcgtcgtgcgcgacgccgcgccc
gatcccgtggcgcagagccccgatgacgtcgccgtgctgcaatataccggcggcaccacc
ggcgtgcccaagggggcgatgctcacccacgccaacctcaccgccaacagcgcgcagatg
ctggcccatgtcggcggcgtgcgggcggtgcaggaacgcacgctgggcgtgctgccgatg
ttccacgtcttcgcgctcaccaccgtgctcaacttctcggtggagatcgcggccgagatg
atcctgctgccccggttcgagatggaccaggtgctcgcgacgatgaagcgcaccaggccc
acccagttcttcggcgtgccgaccatctatgtcgccatgaacggcgttcccgacggcaag
ctgccggacatgtcggcgatccgcgcctgcatctcgggcggggcgccgctgccgctcgat
gtgcgggaagccttcgaaaagcgcaccggcgtgcgcgtggtcgaaggctatggcctgtcc
gaagcctcgccgatcatcgcctgcaacccgatcgaagggctggtgaaggacaatagctgc
ggcccgcgcttccctggcacggtgctggagatccgcgatccggccgagccctcgcgcctc
atgccgctcggcgagcggggcgaggtctgcgcccgcggtccgcaggtgatgaagggatat
tggcagaggcccgacgagaccgaggcctgcttcgccgacggggcgctgcgcaccggcgac
atcggctatctcgacgaggacggctatctcttcctggtcgatcgcatcaaggacgtgatc
ctcgccggcggctataacgtctatccgcgcgtgatcgaggatgcggcctatcaccatccc
gcgatcaaggaagcggtcgcgatcggcgtcttcgataaatatcgcggccaatcgcccaag
ctgttcgtcgccctgcgcgaggacatgacggcgacggaggaggaaatccgggcgttcctc
gccgatcggatcagcaagatcgaaatgcccaaatatatcgagatacgcgatgccttgccg
aagacgctgatcggcaagctttcgaaaaaggaactcgtggaggaggaaaaggcgcggcga
tccgtttcttga
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