KEGG   Sphingomonas sp. MM-1: G432_03100
Entry
G432_03100        CDS       T02498                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sphm  Sphingomonas sp. MM-1
Pathway
sphm00300  Lysine biosynthesis
sphm00470  D-Amino acid metabolism
sphm01100  Metabolic pathways
sphm01110  Biosynthesis of secondary metabolites
sphm01120  Microbial metabolism in diverse environments
sphm01230  Biosynthesis of amino acids
Module
sphm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sphm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    G432_03100 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    G432_03100 (dapF)
Enzymes [BR:sphm01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     G432_03100 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AGH48347
LinkDB
Position
657613..658407
AA seq 264 aa
MSLRFHKMHGLGNDFVVVDARTDPVAIDADRARAIADRHTGIGCDQIILIGPGSDTDVSM
RIWNADGSEVAACGNATRCVPVLVGRDVSIRTAAGILHAALEGDGATVDMGKPSFDWNAI
PLAYAMDTRALPLAWGELANPVAVNVGNPHVVFFVPDVHAVPLETLGPDIEYDLVFPERI
NVNIAHVLAPDHLVMRTWERGAGLTRACGTGACATFAAGRLLDLLAPSARLDLPGGSLRL
AESGDGHLLMSGPATHVFTGEASL
NT seq 795 nt   +upstreamnt  +downstreamnt
atgtcccttcgcttccacaagatgcatggcctcggcaatgattttgtcgtcgtcgatgcg
cgcaccgatcccgtcgccatcgatgcggatcgcgcccgcgccatcgccgatcgccatacc
ggcatcggctgcgatcagatcatcctgatcggccccggcagcgataccgatgtctcgatg
cgcatctggaacgccgacgggtcggaagtggccgcctgcggcaacgccacccgctgcgtg
cccgtgctggtgggccgcgacgtttcgatccgcaccgccgccggcatccttcacgccgcg
ctggaaggcgatggcgcgaccgtggacatgggcaagcccagcttcgactggaacgcgatc
ccgctcgcttatgccatggacacccgcgccctgccactggcctggggggaactggccaat
cccgtcgccgtcaatgtcggcaacccgcatgtcgtgttcttcgtgccggacgtgcatgcc
gtgccgctggagacgctggggccggacatcgaatatgatctcgtctttcccgaacggatc
aacgtcaacatcgcccacgtcctcgcgcccgatcatctcgtgatgcggacatgggaacgc
ggcgccgggctgacgcgcgcctgcggcaccggggcctgcgccaccttcgcggccgggcgg
ctgctcgatctgctagccccgtccgcacggctcgacctgccgggcggcagcctgcggctg
gccgaaagcggggacggccatctgctgatgagcgggccggccacccacgtcttcaccggc
gaggccagcctttga

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