Sphingomonas sp. MM-1: G432_03100
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Entry
G432_03100 CDS
T02498
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sphm
Sphingomonas sp. MM-1
Pathway
sphm00300
Lysine biosynthesis
sphm00470
D-Amino acid metabolism
sphm01100
Metabolic pathways
sphm01110
Biosynthesis of secondary metabolites
sphm01120
Microbial metabolism in diverse environments
sphm01230
Biosynthesis of amino acids
Module
sphm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G432_03100 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G432_03100 (dapF)
Enzymes [BR:
sphm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
G432_03100 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AGH48347
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Position
657613..658407
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AA seq
264 aa
AA seq
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MSLRFHKMHGLGNDFVVVDARTDPVAIDADRARAIADRHTGIGCDQIILIGPGSDTDVSM
RIWNADGSEVAACGNATRCVPVLVGRDVSIRTAAGILHAALEGDGATVDMGKPSFDWNAI
PLAYAMDTRALPLAWGELANPVAVNVGNPHVVFFVPDVHAVPLETLGPDIEYDLVFPERI
NVNIAHVLAPDHLVMRTWERGAGLTRACGTGACATFAAGRLLDLLAPSARLDLPGGSLRL
AESGDGHLLMSGPATHVFTGEASL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcgcttccacaagatgcatggcctcggcaatgattttgtcgtcgtcgatgcg
cgcaccgatcccgtcgccatcgatgcggatcgcgcccgcgccatcgccgatcgccatacc
ggcatcggctgcgatcagatcatcctgatcggccccggcagcgataccgatgtctcgatg
cgcatctggaacgccgacgggtcggaagtggccgcctgcggcaacgccacccgctgcgtg
cccgtgctggtgggccgcgacgtttcgatccgcaccgccgccggcatccttcacgccgcg
ctggaaggcgatggcgcgaccgtggacatgggcaagcccagcttcgactggaacgcgatc
ccgctcgcttatgccatggacacccgcgccctgccactggcctggggggaactggccaat
cccgtcgccgtcaatgtcggcaacccgcatgtcgtgttcttcgtgccggacgtgcatgcc
gtgccgctggagacgctggggccggacatcgaatatgatctcgtctttcccgaacggatc
aacgtcaacatcgcccacgtcctcgcgcccgatcatctcgtgatgcggacatgggaacgc
ggcgccgggctgacgcgcgcctgcggcaccggggcctgcgccaccttcgcggccgggcgg
ctgctcgatctgctagccccgtccgcacggctcgacctgccgggcggcagcctgcggctg
gccgaaagcggggacggccatctgctgatgagcgggccggccacccacgtcttcaccggc
gaggccagcctttga
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