Sphingomonas sp. MM-1: G432_04895
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Entry
G432_04895 CDS
T02498
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sphm
Sphingomonas sp. MM-1
Pathway
sphm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G432_04895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphm03400
]
G432_04895
Enzymes [BR:
sphm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G432_04895
DNA repair and recombination proteins [BR:
sphm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G432_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
PIF1
AAA_16
AAA_22
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AGH48706
LinkDB
All DBs
Position
complement(1016133..1018304)
Genome browser
AA seq
723 aa
AA seq
DB search
MNPRARVLLLNPALGPLDYRVDPGQDVRPGSIVLAPLGPRQWTGVVWEADRMPSDAEVGD
NRLRPLAGVYDLPPLGEPLRRLIEWTANYYLAPPAAVLRMALSSASALDGARTVTEYRAT
GRVPDRLTPQREQALERIGERQGLVRELAAIADVSDAVIRGLVKAGAIEAVEVSVDDPFL
DPDPDHARPDLSADQAAVAGRLVEAVRAHAFQPFLLDGVTGSGKTEVYFEAVAEAIRQGR
QTLVLLPEIALTEPFLKRFAARFGHAPIAWHSDLRQSQRRRAWRAIATGEAKVVVGARSA
LFLPYAKLGLIVVDEAHETSFKQEDGVMYHARDVAVMRGGFESCPVVLASATPAIETRQQ
VALGRYEELKLPGRYGVAQMPDINEVDLLRDPPPRGRWLAPTLVKAIEETLERKEQALLF
LNRRGYAPLTLCRTCGHRFQCPNCTAWMVEHRLMARLACHHCGHVMPPPAFCPECKAEDS
LVACGPGVERIADEASALFPDAKTAVVTSDTLWSPAKAAEFVGRMEAGDIDIVIGTQLIT
KGYHFPNLTLVGVVDADLGLAGGDLRAAERSFQQIAQVAGRAGRGAKPGHVYIQTREPSA
PVIRALVSGDAESFYAAETESRRAANAPPFGRYAAIIISSEKLEEAVETARLIGRTAPEV
DGMHVFGPAPAPLAMLRGRHRQRLLVHARRALDVQDVIRQWLGALEWPRGVRVAVDVDPY
SFV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccctcgcgcccgtgtcctcctgctcaaccccgcgctcggtccgctcgattatcgg
gtggatccggggcaggacgtgcggccgggatcgatcgtgctggcgccgctcggcccccgg
cagtggaccggggtggtgtgggaggcggatcgtatgccttccgatgcggaggtgggcgac
aatcgtctgcgcccgctggccggcgtctatgatctgccgccgctgggcgagccgctgcgc
cggctgatcgagtggaccgccaattattatctcgcgccgccggccgccgtgctgcggatg
gcgctttcctccgcatcggcgctggatggcgcgcggaccgtgaccgaatatcgcgccacc
ggccgggtgccggatcgcctcaccccgcagcgcgagcaggcgctggagcggatcggcgag
cggcaggggctggtgcgcgagctggccgccatcgccgacgtttccgatgcggtgatccgg
gggctggtgaaggccggcgcgatcgaggcggtggaggtttcggtcgacgatcccttcctc
gatcccgatcccgaccatgcccggcccgatctttcggcggatcaggcggcggtggcgggc
cggctggtggaggcggtgcgcgcgcacgcattccagcccttcctgctcgacggcgtgacc
ggatcgggcaagaccgaggtttatttcgaggcggtggccgaggcgattcggcaggggcgg
cagacgctggtgctgctgcccgagatcgccttgaccgagccgttcctgaagcgcttcgcc
gcgcgtttcggccatgcgcccatcgcctggcattcggacctgcgccagtcgcagcggcgg
cgggcctggcgggcgattgcgaccggcgaggcgaaggtggtggtgggcgcgcgctccgcc
ctgttcctgccttatgcgaagctcggcctgatcgtggtggacgaggcgcacgagaccagc
ttcaagcaggaagacggcgtgatgtatcacgcccgcgacgtggcggtgatgcgcggcggc
ttcgaaagctgcccggtggtgctggcatccgccacgcccgcgatcgagacgcgccagcag
gtggcgctgggccgctatgaggagctgaagctgcccggccgttacggcgtggcgcagatg
cccgatatcaacgaggtggacctgctgcgcgatccgccgccgcgcggccgctggctggcg
ccgacgctggtgaaggcgatcgaggagacgctggagcgcaaggaacaggcgctgttgttc
ctcaaccggcggggctatgcgccgctcactttgtgccggacctgcgggcaccgcttccaa
tgccccaattgcacggcctggatggtggagcaccggctgatggcgcggctggcctgccat
cattgcggccatgtcatgccgccgccggccttctgccccgaatgcaaggcggaggattcg
ctggtcgcctgcgggccgggggtggagcggatcgccgatgaagcgtccgcgctcttcccc
gacgcgaagacggcggtggtgacgtcggacacgctctggtcgccggccaaggcggcggag
ttcgtcggccggatggaggcgggcgatatcgatatcgtcatcggcacccagctcatcacc
aagggctatcacttcccgaacctcactctggtgggcgtggtggatgccgatctcgggctg
gccggcggcgatctgcgcgcggcggaacgcagcttccagcagatcgcgcaggtggcgggg
cgggcagggcgcggcgccaagcccggccatgtctatatccagacgcgcgagccgtccgcg
cccgtcatccgcgcgctggtgtcgggtgatgcggaaagcttctatgccgccgaaaccgaa
tcccgccgcgccgccaacgcgccgcccttcggccgttacgccgcaatcatcatctcgtcc
gaaaagctggaggaagcggtggaaacggcccggctgatcggccgcaccgcgcccgaggtg
gatggcatgcacgtcttcggccccgcgccggccccgctcgccatgctgcgcggccggcat
cgccagcgcctgctggtccatgcccgccgcgcgctcgacgtgcaggatgtgatccgccag
tggctgggcgcgctggaatggccgcgcggcgtgcgcgtggcggtggacgtggacccttac
tccttcgtttga
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