Sphingomonas sp. MM-1: G432_05960
Help
Entry
G432_05960 CDS
T02498
Name
(GenBank) RNA polymerase sigma 28 subunit FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sphm
Sphingomonas sp. MM-1
Pathway
sphm02020
Two-component system
sphm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G432_05960
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G432_05960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphm03021
]
G432_05960
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sphm02035
]
G432_05960
Transcription machinery [BR:
sphm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G432_05960
Bacterial motility proteins [BR:
sphm02035
]
Flagellar system
Flagellar assembly proteins
Stator
G432_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AGH48919
LinkDB
All DBs
Position
complement(1222821..1223549)
Genome browser
AA seq
242 aa
AA seq
DB search
MAFANAAISQTYQRRPARARPGDLAREHMPLVRRIAWHVHGRVSNAIDIEDLVQIGMVAL
VEAANNFEDRGFAFSTYATTRIRGAMIDHLRRHANICRSAMSRRREIARVRARLEQALGR
PATDAEMADAMGLSAADYREAADSTAAVRQESLDEVYSDQSMWFADIEERVDQTLERDEL
RDLLAGHIAELPEREALVLQLYFVEEMNLDEIGLTLGVGAARVCQIKKAALDRLRARLAD
HR
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggccttcgccaacgccgccatcagccagacctatcagcgccgccccgcgcgggcgcgc
cccggcgatctggcgcgggaacatatgccgctcgtgcgtcgcatcgcctggcacgtccat
ggccgggtgtcgaacgccatcgacatcgaggatctggtgcagatcggcatggtcgcgctg
gtcgaggcggccaacaatttcgaggatcgcggtttcgctttctccacttatgcgacgacg
cgcatccgcggggcgatgatcgatcatctgcgccgccacgccaatatctgccgttcggcg
atgagccgcaggcgggagatcgcccgcgtgcgcgcccggctggagcaggcgctgggccgg
cccgcgaccgatgccgagatggccgacgccatggggctgagcgccgccgactatcgcgag
gcggcggacagcacggcggcggtgcggcaggaatcgctggatgaggtctattccgaccag
tcgatgtggttcgccgacatcgaggagcgcgtggaccagacgctggagcgggatgagctg
cgcgacctgctggccggccatatcgccgagctgcccgagcgcgaggcgctggtgctgcag
ctttatttcgtcgaggagatgaacctggacgagatcgggctgacgctgggcgtgggcgcc
gcgcgcgtgtgccagatcaagaaggccgcgctcgatcggctgcgggcaaggctggccgac
caccgttga
DBGET
integrated database retrieval system
