Sphingomonas sp. MM-1: G432_06535
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Entry
G432_06535 CDS
T02498
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sphm
Sphingomonas sp. MM-1
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphm03032
]
G432_06535
03400 DNA repair and recombination proteins [BR:
sphm03400
]
G432_06535
Enzymes [BR:
sphm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G432_06535
DNA replication proteins [BR:
sphm03032
]
Prokaryotic type
DNA Topoisomerases
G432_06535
DNA repair and recombination proteins [BR:
sphm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G432_06535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2835
Motif
Other DBs
NCBI-ProteinID:
AGH49032
UniProt:
M4SEK4
LinkDB
All DBs
Position
1350520..1353264
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AA seq
914 aa
AA seq
DB search
MASVPPPSENSDISPVSIVDEMKSSYLDYAMSVIVSRALPDVRDGLKPVHRRILFASQEG
GFVPGRPYRKSAKIVGDVMGNYHPHGDAAIYMALARLAQDWSMRVPLVDGQGNFGSMDPD
MPASMRYTEARLAKPAMALLADIDKDTVDFQPNYDGSLQEPQVLPARFPNLLVNGSGGIA
VGMATNIPPHNLGEVIAACKAFIHNGGISSEELHEIIPGPDFPTGGLILGKGGARNAYLN
GKGSIIMRSRHVIEEGRGDRRSIVLTEIPYQTGKSALVEGIAEAAKEKRIEGVSDIRDES
NRFGVRIVIELKRDATPEVVLNQLWRHTSAQTSFPANMLAIRGGRPEVLNLRDIIEAFVK
FREEVITRRSKFELLKARERAHILLGLVIAVTNLDEVVRIIRGSSSPAEARAALLAREWP
VAEIAAYIKLVEAVEHEVDGDTYRLSDAQVRAILDLRLHRLTALGRDEIGDELAKLATSI
GELLHILGDRARLYEVMEEELDLIAAEFATPRKTTIAPAGDDIDDEDLIEREEMVVTVTM
GGYIKRTPLEAFRAQKRGGKGRSGMGTKDEDAVIALFVTSTHTPVLFFSNHGKVYRLKVW
KLPEGAPQARGRPMVNLLPLAAGETISTVLPLPEDEAVWKDLHVMFATAKGTVRRNSMDA
FTNVPSNGKIAMRFDEGSDDRLIGVALLTEEDDVLLATRQGKAIRFEATAVREFQSRTST
GVRGMTLKEGDEVISLSILHRAGASQEEREDYLRFAPWKAEKEGAPQMPAERFAELQARE
QFILTVCANGYGKLSSAYEYRRTGRGGQGITNIDNIARNGPVVASFPALTSEQLMLVTDQ
AKMIRLGLDTLRVIGRGSAGVRLFNVADDEHVVSAAKIEESDEAEDDAGNGTEADDAAGG
DTAADTGDEAAPEA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
ttggccagcgtcccgccgcccagcgaaaacagcgacatctcccccgtctcgatcgtcgac
gagatgaagtcgagctatctcgactatgccatgtcggtgatcgtcagccgcgcgctgccc
gatgtgcgcgacggcctgaagccggtgcaccggcgcatccttttcgccagccaggaaggc
ggcttcgtccccggccgcccctatcgcaagtcggccaagatcgtcggcgacgtgatgggc
aattatcacccgcatggcgacgccgcgatctacatggcgctcgcccgtctggcgcaggac
tggtcgatgcgggtgccgctggtcgacggccagggcaatttcgggtcgatggacccggac
atgccggcttccatgcgctacaccgaggcgcggctcgccaagccggccatggcgctgctg
gcggacatcgacaaggacaccgtcgatttccagccaaattatgacggatcgctgcaggag
ccgcaggtcctgccggcgcgcttccccaacctgctggtcaacggatcgggcggcatcgcc
gtcggcatggccaccaacatcccgccccacaatcttggcgaggtgatcgcggcctgcaag
gcgttcatccacaatggcgggatcagctcggaagagctgcacgagatcatccccggcccg
gacttcccgaccggcggcctgatcctgggcaagggcggcgcgcgcaacgcctatctgaac
ggcaagggatcgatcatcatgcgatcccggcatgtgatcgaggaagggcgtggcgaccgg
cggtcgatcgtgctgaccgagatcccctaccagaccggcaagagcgccctggtggaaggc
attgccgaggccgccaaggaaaagcggatcgagggcgtttcggacatccgcgacgaatcc
aaccgcttcggcgtgcgcatcgtcatcgagctgaagcgcgatgccaccccggaagtggtg
ctgaaccagctctggcggcacacctctgcgcagaccagcttcccggccaacatgctcgcc
atccgcggcggccgcccggaagtgctgaacctgcgcgacatcatcgaggccttcgtcaag
ttccgcgaggaagtgatcacgcggcgttcgaagttcgagctgctgaaggcccgcgagcgc
gcccatatcctgctcggcctcgtcatcgccgtcaccaacctggacgaggtggtgcggatc
atccgcggctcctccagcccggccgaggcgcgcgccgccctgctcgcccgcgaatggcca
gtggcggagatcgccgcctatatcaagctggtcgaggcggtggagcatgaggtggatggc
gacacctaccgcctgtccgacgcgcaggtgcgcgccatcctcgacctgcgcctgcaccgc
ctgacggcgctgggccgcgacgagatcggcgacgagctggccaagctcgccacctcgatc
ggcgagctgctgcacatattgggcgaccgcgcccgcctttacgaggtgatggaggaggag
ctcgacctcatcgccgccgaattcgccaccccacgcaagacgacgatcgcgccggccggc
gacgatatcgacgacgaggacctgatcgagcgcgaggagatggtcgtcaccgtcaccatg
ggcggctatatcaagcgcaccccgctcgaagccttccgcgcccagaagcgcggcggcaag
ggccgttccggcatggggacgaaggatgaggacgccgttatcgcgctgttcgtcacctcc
acccacacgccggtgctgttcttctccaaccacggcaaggtctatcgcctgaaggtgtgg
aagctgcccgagggcgcgccccaggcgcgcggccggccgatggtgaacctgctgccgctg
gcggcgggcgagaccatctccaccgtgctgccgctgcccgaggacgaggcggtgtggaag
gacctgcacgtcatgttcgccacggccaagggcacggtgcgccgcaattcgatggatgcg
ttcaccaacgtgccctcgaacggcaagatcgccatgcgcttcgacgagggcagcgacgat
cgcctgatcggcgtcgcgctgctgaccgaggaggacgacgtgctgctggcgacccgccag
ggcaaggccatccgcttcgaggcgacggccgtgcgcgagttccagagccgcacctccacc
ggcgtgcgcggcatgacgctgaaggaaggcgacgaggtgatctcgctctccatcctgcac
cgcgccggcgccagccaggaggaacgcgaggattatctgcgcttcgccccgtggaaggcg
gagaaggaaggcgcgccgcagatgcctgccgagcgcttcgccgagttgcaggcgcgtgag
cagttcatcctcaccgtctgcgccaacggctacggcaagctcagctctgcctatgaatat
cgccgcaccgggcgcggcggccagggcatcaccaatatcgacaatatcgcccgcaacggg
ccggtggtggcgagcttcccggcgctgaccagcgagcagctgatgctcgtgaccgatcag
gcgaagatgatccgcctcggcctcgatacgctgcgcgtgatcgggcgcggcagcgcgggc
gtgcgcctgttcaacgtggctgacgacgagcatgtcgtgtccgccgccaagatcgaggaa
agcgacgaggcggaagacgatgccgggaatggcacggaggccgatgacgccgccggcgga
gatacggccgccgataccggcgacgaagccgcccccgaagcctga
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