Sphingomonas sp. MM-1: G432_07610
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Entry
G432_07610 CDS
T02498
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sphm
Sphingomonas sp. MM-1
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphm03016
]
G432_07610
Enzymes [BR:
sphm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G432_07610
Transfer RNA biogenesis [BR:
sphm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G432_07610
Prokaryotic type
G432_07610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AGH49247
UniProt:
M4SF58
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All DBs
Position
complement(1581984..1582880)
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AA seq
298 aa
AA seq
DB search
MDGWIIIDKPVGIGSTQVVSAVKRVLRQGGYGKHKVGHGGTLDPLASGVLPIAVGEATKL
SGRMLDADKAYDFTIGFGTETDTLDAEGKAIATSDVRPPRAAVEAVLPRFTGAIDQVPPA
FSALKVDGARAYDLARAGEEVVLKSRAVTIHDLRLSAWDGAGATLSARVSKGTYIRSLAR
DIAYALDTVGHVTMLRRTKAGPFTLDQAISLDKLEESAKGHALEDILLPLTAGLDDIPAL
AVSPDQARALREGRKLIGIAKHQGLHLAVSGQVPVALVEVSGPEIRVVRGFNIRDVEG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggacggatggatcataatcgacaagccggtgggcatcggctccacgcaggtcgtatcg
gcggtgaagcgggtgctgcgccagggcggctatggcaagcacaaggtcggccatggcggc
acgctcgatccgcttgcctccggcgtgctccccatcgcggtgggcgaggcgaccaagctt
tcggggcggatgctggacgccgacaaggcctatgacttcaccatcggcttcggcacggag
accgacacgctggatgccgagggcaaggcgatcgccacctccgatgtccggccgccgcgc
gcggcggtggaggcggtgctgccgcgcttcaccggcgcgatcgatcaggtgccgcccgct
ttctcggcgctgaaggtggatggcgcgcgggcctatgatctggcgcgcgccggcgaggag
gtggtgctgaaatcccgcgccgtcacgatccacgatctccggctttcggcatgggacggg
gcgggcgccacgctttccgcccgcgtctccaagggcacctatatccgcagcctcgcccgc
gatatcgcttatgcccttgataccgttggccacgtcaccatgttgcggcggaccaaggcg
gggccattcaccctggatcaggcgatttcgctggacaagctggaggaatccgctaagggc
cacgcgcttgaagacatactcctgccattgacggcggggctggacgacatcccggctctc
gcggtcagtcccgatcaggcaagggcgctccgcgaggggcggaagttgatcgggatcgcc
aagcaccaaggccttcatctggcggtatcgggccaagtccccgtcgccctcgtggaggtt
tccggcccggagatacgggtggtgcgcggcttcaacattcgcgatgtcgaaggatga
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