Sphingomonas sp. MM-1: G432_08860
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Entry
G432_08860 CDS
T02498
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphm
Sphingomonas sp. MM-1
Pathway
sphm00061
Fatty acid biosynthesis
sphm00071
Fatty acid degradation
sphm01100
Metabolic pathways
sphm01212
Fatty acid metabolism
sphm02024
Quorum sensing
sphm04146
Peroxisome
Module
sphm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
G432_08860
00071 Fatty acid degradation
G432_08860
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
G432_08860
09145 Cellular community - prokaryotes
02024 Quorum sensing
G432_08860
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphm01004
]
G432_08860
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphm04147
]
G432_08860
Enzymes [BR:
sphm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
G432_08860
Lipid biosynthesis proteins [BR:
sphm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
G432_08860
Exosome [BR:
sphm04147
]
Exosomal proteins
Exosomal proteins of breast milk
G432_08860
Exosomal proteins of breast cancer cells
G432_08860
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AGH49497
LinkDB
All DBs
Position
complement(1833452..1835248)
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AA seq
598 aa
AA seq
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MRTLEHFPNLVTMFFTRAREKGGAPFLWAKRGDGWQPTSWAEAAREVAALAEGLRGMGLR
RGDRVMLVSENRPEWCIADLAIMAAGLVTVPTYTTNTERDHAHILENSGARAVIVSTPKL
ARALMPAVLRSTGCRHVIGIEPLRIGQSGDVRFHDWAELIASQPGDIAAAEAAADFGRDD
LACIIYTSGTGGAPRGVRQHHGAILHNVAGCTTIIAEDFGWDDEVFLSFLPLSHAYEHTG
GQHFPIGLGAQIYYAEGLEKLASNIEELRPTIMVVVPRLFEVLRARVLKSIEKQGRTAQY
LMRRALQIGEKNYAGRSTLGDLPMKLILRRTLKPKVGKRFGGRMKAMVSGGAPLNPEVGL
FFHSLGLTFLQGYGQTEAAPVISCNRPSAGIKMDTVGPPLPGVEVRIADDGEILVRGELV
MHGYWRNEEETARVLKDGWLHTGDVGHIDEKGRIVITDRKKDIIVNDKGDNVAPQKIEGM
LTLEPEILQAMVTGDRRPHLVGLIVPDPEWAREWAEAQGIAYDPAVLRGDPAFQKALMAA
VDRVNGSLSVIEKVRRILIADEPFSIENEMLTPSLKIRRHIIRKAYGAALDALYGTRS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgctggaacatttccccaatctcgtcaccatgttcttcacgcgcgcacgggag
aagggcggcgcgcccttcctctgggccaagcggggtgatggctggcagccgacaagctgg
gctgaggccgcgcgcgaggtggcggcgctggccgaaggcctgcgcggcatggggctgagg
cgcggcgaccgggtgatgctggtttccgaaaaccgccccgaatggtgcatcgccgatctc
gcgatcatggcggccgggctggtgacggtgcccacctacaccaccaataccgagcgggat
cacgcccatatcctggagaatagcggcgcgcgcgcggtgatcgtgtcgacgcccaagctg
gcccgcgcgctgatgccggcggtgctgcgttccaccggctgccgccacgtcatcggtatc
gagccgctgcgcatcggccagtcgggcgacgtgcgcttccacgactgggcggagctgatc
gcatcccagcccggcgatatcgccgcggcggaggcggccgccgatttcgggcgcgacgac
ctcgcctgcatcatctacacctccggcaccggcggcgcgccgcgcggcgtgcgccagcat
catggcgcgattctccacaatgtcgccggctgcaccacgatcatcgccgaggatttcggc
tgggatgacgaggtgttcctatccttcctgcccctgagccacgcctatgagcataccggc
ggccagcatttcccgatcgggctcggcgcgcagatctattatgccgaggggctggaaaag
ctcgcctccaatatcgaggagctgcgccccaccatcatggtggtcgtccctcgcctgttc
gaggtgctgcgcgcccgcgtgttgaaatcgatcgagaagcagggccgcaccgcgcaatat
ctgatgcgccgcgcgctccagatcggcgagaagaattatgccggccgctccacgctgggc
gacctgccgatgaagctcatcctgcggcgcaccctgaagcccaaggtgggcaagcgcttc
ggcgggcggatgaaggcgatggtgtcgggcggcgcgccgctcaacccggaagtggggctg
ttcttccactcattgggcctcaccttcctgcagggctatggccagacggaggcggcgccg
gtcatctcctgcaaccgtccctcggccgggatcaagatggacacggtcggcccgccgctg
cccggcgtggaggtccgcatcgccgacgatggcgagattctcgtgcgcggcgagctggtg
atgcacggctattggcggaatgaggaggagacggcgcgcgtcctcaaggacggctggctg
cacaccggcgatgtcggccatatcgacgagaagggccgcatcgtcatcaccgatcgcaag
aaggacatcatcgtcaacgacaagggcgacaatgtcgcgccccagaagatcgaggggatg
ctgacgctcgagccggagatcctgcaggcgatggtgacgggcgaccggcggccacatctg
gtcggcctgatcgtccccgatcccgaatgggcgcgcgaatgggcggaggcgcaggggatt
gcctatgaccccgccgtgctgcgcggcgatcccgccttccagaaggcgctgatggcggcg
gtcgatcgcgtgaacggcagcctttcggtgatcgagaaggtccgccgcatcctgatcgcc
gacgaacccttctcgatcgagaatgagatgctcacgccctcgctcaagatccgccgtcac
atcatccgcaaggcctatggcgcggcgttggacgcgctctacggcacgcgctcctga
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