KEGG   Sphingomonas sp. MM-1: G432_08860
Entry
G432_08860        CDS       T02498                                 
Name
(GenBank) AMP-dependent synthetase/ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
sphm  Sphingomonas sp. MM-1
Pathway
sphm00061  Fatty acid biosynthesis
sphm00071  Fatty acid degradation
sphm01100  Metabolic pathways
sphm01212  Fatty acid metabolism
sphm02024  Quorum sensing
sphm04146  Peroxisome
Module
sphm_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sphm00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    G432_08860
   00071 Fatty acid degradation
    G432_08860
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    G432_08860
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    G432_08860
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sphm01004]
    G432_08860
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sphm04147]
    G432_08860
Enzymes [BR:sphm01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     G432_08860
Lipid biosynthesis proteins [BR:sphm01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   G432_08860
Exosome [BR:sphm04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   G432_08860
  Exosomal proteins of breast cancer cells
   G432_08860
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: AGH49497
LinkDB
Position
complement(1833452..1835248)
AA seq 598 aa
MRTLEHFPNLVTMFFTRAREKGGAPFLWAKRGDGWQPTSWAEAAREVAALAEGLRGMGLR
RGDRVMLVSENRPEWCIADLAIMAAGLVTVPTYTTNTERDHAHILENSGARAVIVSTPKL
ARALMPAVLRSTGCRHVIGIEPLRIGQSGDVRFHDWAELIASQPGDIAAAEAAADFGRDD
LACIIYTSGTGGAPRGVRQHHGAILHNVAGCTTIIAEDFGWDDEVFLSFLPLSHAYEHTG
GQHFPIGLGAQIYYAEGLEKLASNIEELRPTIMVVVPRLFEVLRARVLKSIEKQGRTAQY
LMRRALQIGEKNYAGRSTLGDLPMKLILRRTLKPKVGKRFGGRMKAMVSGGAPLNPEVGL
FFHSLGLTFLQGYGQTEAAPVISCNRPSAGIKMDTVGPPLPGVEVRIADDGEILVRGELV
MHGYWRNEEETARVLKDGWLHTGDVGHIDEKGRIVITDRKKDIIVNDKGDNVAPQKIEGM
LTLEPEILQAMVTGDRRPHLVGLIVPDPEWAREWAEAQGIAYDPAVLRGDPAFQKALMAA
VDRVNGSLSVIEKVRRILIADEPFSIENEMLTPSLKIRRHIIRKAYGAALDALYGTRS
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgcgcacgctggaacatttccccaatctcgtcaccatgttcttcacgcgcgcacgggag
aagggcggcgcgcccttcctctgggccaagcggggtgatggctggcagccgacaagctgg
gctgaggccgcgcgcgaggtggcggcgctggccgaaggcctgcgcggcatggggctgagg
cgcggcgaccgggtgatgctggtttccgaaaaccgccccgaatggtgcatcgccgatctc
gcgatcatggcggccgggctggtgacggtgcccacctacaccaccaataccgagcgggat
cacgcccatatcctggagaatagcggcgcgcgcgcggtgatcgtgtcgacgcccaagctg
gcccgcgcgctgatgccggcggtgctgcgttccaccggctgccgccacgtcatcggtatc
gagccgctgcgcatcggccagtcgggcgacgtgcgcttccacgactgggcggagctgatc
gcatcccagcccggcgatatcgccgcggcggaggcggccgccgatttcgggcgcgacgac
ctcgcctgcatcatctacacctccggcaccggcggcgcgccgcgcggcgtgcgccagcat
catggcgcgattctccacaatgtcgccggctgcaccacgatcatcgccgaggatttcggc
tgggatgacgaggtgttcctatccttcctgcccctgagccacgcctatgagcataccggc
ggccagcatttcccgatcgggctcggcgcgcagatctattatgccgaggggctggaaaag
ctcgcctccaatatcgaggagctgcgccccaccatcatggtggtcgtccctcgcctgttc
gaggtgctgcgcgcccgcgtgttgaaatcgatcgagaagcagggccgcaccgcgcaatat
ctgatgcgccgcgcgctccagatcggcgagaagaattatgccggccgctccacgctgggc
gacctgccgatgaagctcatcctgcggcgcaccctgaagcccaaggtgggcaagcgcttc
ggcgggcggatgaaggcgatggtgtcgggcggcgcgccgctcaacccggaagtggggctg
ttcttccactcattgggcctcaccttcctgcagggctatggccagacggaggcggcgccg
gtcatctcctgcaaccgtccctcggccgggatcaagatggacacggtcggcccgccgctg
cccggcgtggaggtccgcatcgccgacgatggcgagattctcgtgcgcggcgagctggtg
atgcacggctattggcggaatgaggaggagacggcgcgcgtcctcaaggacggctggctg
cacaccggcgatgtcggccatatcgacgagaagggccgcatcgtcatcaccgatcgcaag
aaggacatcatcgtcaacgacaagggcgacaatgtcgcgccccagaagatcgaggggatg
ctgacgctcgagccggagatcctgcaggcgatggtgacgggcgaccggcggccacatctg
gtcggcctgatcgtccccgatcccgaatgggcgcgcgaatgggcggaggcgcaggggatt
gcctatgaccccgccgtgctgcgcggcgatcccgccttccagaaggcgctgatggcggcg
gtcgatcgcgtgaacggcagcctttcggtgatcgagaaggtccgccgcatcctgatcgcc
gacgaacccttctcgatcgagaatgagatgctcacgccctcgctcaagatccgccgtcac
atcatccgcaaggcctatggcgcggcgttggacgcgctctacggcacgcgctcctga

DBGET integrated database retrieval system