Sphingomonas sp. MM-1: G432_12280
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Entry
G432_12280 CDS
T02498
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sphm
Sphingomonas sp. MM-1
Pathway
sphm03030
DNA replication
sphm03430
Mismatch repair
sphm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G432_12280
03430 Mismatch repair
G432_12280
03440 Homologous recombination
G432_12280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphm03032
]
G432_12280
03400 DNA repair and recombination proteins [BR:
sphm03400
]
G432_12280
Enzymes [BR:
sphm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G432_12280
DNA replication proteins [BR:
sphm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G432_12280
DNA repair and recombination proteins [BR:
sphm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G432_12280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AGH50177
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All DBs
Position
2585019..2585900
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AA seq
293 aa
AA seq
DB search
MDTQTKVGRIDAPAAGGVRLLHPLRLQEGPTGEGSGRGPYIGVAVDCETTGLDWKAGRII
ELALRRVRYDRDGTITDIDRAYEWREDPGEPLTEEVSRLTGLTDQDLAGEEIDTDAAVRL
LRSASFVVAHNSAFDRRWIEARLPEAAGLRWCCSMAQVDWRGRGFDGKALGYLLVQNGFY
FCGHRAANDVDAMIEMLRHRDGRGRTALAEMIERGSAPSWVVRASGAHFDLKDALRARGY
RWSADLKVWAKEVADDDLVPEQLWLAGNVYSADAKAKALCPELVRVTPRTRFL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggatacccagaccaaggtcgggcgcattgacgcgcccgccgccggaggcgtgcgcctc
cttcatcccctgcgattgcaggaagggccgaccggcgaaggatccgggcggggcccgtac
atcggcgtcgccgtcgattgcgagacgacgggcctcgactggaaggcaggccgcatcatc
gaactggctcttcgccgcgtgcgctacgatcgcgacggcaccatcacggacatcgatcgc
gcgtacgagtggcgggaggatcccggcgaaccgctgaccgaggaggtctcgcgcctcacc
ggtctcaccgaccaggacctggccggcgaggagatcgacacggatgccgccgtccggctc
ctccggtccgcctcgttcgtggtcgcccacaatagcgccttcgacaggcgctggatcgag
gcgcggctgccggaggccgccgggcttcgctggtgctgctccatggcccaggtggattgg
cgcggccgtggcttcgacggcaaggccctgggctatctgctggtgcagaacggcttctac
ttctgcggccaccgggcggcgaacgacgtcgacgcgatgatcgagatgctgcgccaccgc
gatggccggggccgcacggccttggcggagatgatcgagcgcggctcggcgccctcctgg
gtcgtgcgggcgagcggcgcgcacttcgatctgaaggatgcgctgcgcgcccgcggctat
cgttggtcagcggacctgaaggtctgggcaaaggaggtcgcggacgacgacctcgtgccc
gagcagctctggctcgccggcaacgtctactccgcggacgcgaaggctaaagcgctctgt
cccgaactcgttcgcgtcacgccgcgcacgcgcttcctctga
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