Sphingomonas sp. MM-1: G432_12615
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Entry
G432_12615 CDS
T02498
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sphm
Sphingomonas sp. MM-1
Pathway
sphm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
G432_12615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphm03400
]
G432_12615
Enzymes [BR:
sphm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
G432_12615
DNA repair and recombination proteins [BR:
sphm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
G432_12615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Vps53_N
DUF883
CCDC93_CC
DUF7260
CAP_N-CM
Paralemmin
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
AGH50242
UniProt:
M4SI33
LinkDB
All DBs
Position
complement(2655464..2655712)
Genome browser
AA seq
82 aa
AA seq
DB search
MGQDEDTIAELSFEDALKRLETIVQRLESGEETLDNSIRLYAEGDALRAQCEKRLKDAQA
RIEKISLGADGRPAGAQPFDVG
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggggcaggatgaagacaccatcgccgagctttcgttcgaggacgcgctgaagcggctg
gagaccatcgtccagcggctggagagcggcgaggagacgctcgacaattcgatccgcctt
tatgccgaaggcgatgcgttgcgcgcgcagtgcgagaagcggctgaaggacgcgcaggcg
cgaatcgagaagatcagcctgggcgccgacggccggccggcgggcgcgcagcccttcgat
gtcggctga
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