Sphingomonas sp. MM-1: G432_12620
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Entry
G432_12620 CDS
T02498
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphm
Sphingomonas sp. MM-1
Pathway
sphm00061
Fatty acid biosynthesis
sphm00071
Fatty acid degradation
sphm01100
Metabolic pathways
sphm01212
Fatty acid metabolism
sphm02024
Quorum sensing
sphm04146
Peroxisome
Module
sphm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
G432_12620
00071 Fatty acid degradation
G432_12620
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
G432_12620
09145 Cellular community - prokaryotes
02024 Quorum sensing
G432_12620
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphm01004
]
G432_12620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphm04147
]
G432_12620
Enzymes [BR:
sphm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
G432_12620
Lipid biosynthesis proteins [BR:
sphm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
G432_12620
Exosome [BR:
sphm04147
]
Exosomal proteins
Exosomal proteins of breast milk
G432_12620
Exosomal proteins of breast cancer cells
G432_12620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AGH50243
LinkDB
All DBs
Position
complement(2655745..2657448)
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AA seq
567 aa
AA seq
DB search
MADPASIWRTAYRHPTSWEASYPPLSLPAMLEASAARWPDRPLIDFFGRRFSYAETLSGA
RRAAVGLAALGVGKGDRVGLFLPNVPHYVAAYYGALMLGATIVNFSPLYTVEELAHQVQD
SGTRILVTVSAKALLPTALKVMETSGLERLVVGSVAGALPPAKSLLYRLFQRKEVAKAPH
DPRIVPFSRLIANDGALAPVPIDPERDVALLQYTGGTTGVPKGAKLTHQAMTANARQIVA
VDPHRDEDDRIIGVLPLFHIFANAAVLNRTVMNGGEIVMLPRFDAAGTLAAIQRTRATAM
PGVPTMYQALLDHPKTAGTDFSSLRVCVSGGAPLAAELKARFEGVTGAKLCEGYGLTESG
IASANPYEGENRTGTIGQPLPATTFRLVDRDDPRKPAADGEPGEIVIHGPQIMTGYWNRP
DADADIFVGGGLRTGDVGLIDADGYIRIVDRLKDMISVGGFKVFPSQIEAILYHHPAVKE
ALVIGIPDAYHGENPKAFVTLHPGSEAVTGEALRAWLNPQVGKHERVVAVEIRESLPHTL
VGKLSRKELVAEERARAEASAKAATPA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcccgcttccatctggcgaaccgcctaccgccaccccaccagctgggaggcg
agctacccgccactcagcctgccggcgatgctggaggcttccgccgcgcgctggcccgat
cggccgctgatcgatttcttcggccgccgcttcagctatgccgaaacgctttccggcgcg
cgccgggcggcggtgggcctggccgcgctgggcgtgggcaagggcgatcgcgtcggcctg
ttcctgcccaacgtgcctcattatgtcgcggcttattacggcgcgctgatgctgggggcg
acgatcgtcaacttctcgccgctctacacggtggaggaactggcccatcaggtgcaggat
tcgggcacgcgcatcctcgtcaccgtatcggcgaaggcgctgttgcccaccgcgctgaag
gtgatggagacgagcgggctggagaggcttgtcgtcggatcggtggcgggcgcgctgccg
ccggccaagtcgctgctctaccgcctgttccagcgcaaggaggtggcgaaggcgccgcac
gatccccggatcgtccccttttcgcgcctgatcgccaatgacggcgcgctcgcccccgtg
ccgatcgatcccgagcgcgacgtcgccctgctgcaatataccggcggcaccaccggcgtg
cccaagggcgccaagctgacccaccaggcgatgacggccaatgcgcggcagatcgtggcg
gtcgatccgcatcgcgacgaggacgaccggatcatcggcgtgctgccgctgttccacatc
ttcgccaatgccgccgtgctcaaccgcaccgtgatgaacggcggcgagatcgtgatgctg
ccgcgcttcgacgccgccggcacgctggccgcgatccagcgcacccgcgccaccgccatg
ccgggcgtgccgaccatgtatcaggcgctgctggaccatcccaagacggcgggcaccgat
ttctcctcgctgcgagtctgcgtttcgggcggggcgccgctggcggccgagctgaaggcg
cggttcgagggcgtgaccggcgccaagctgtgcgaaggctatggcctcaccgaaagcggc
atcgccagcgccaatccctatgagggcgagaaccgcaccggcacgatcggccagccgctg
cccgccaccaccttccgcctggtggaccgcgacgatccccgcaagccggcggcggacggc
gagcccggcgagatcgtgatccacggcccccagatcatgaccggatattggaaccggccg
gatgcggacgccgacatcttcgtgggcggcgggctgcgcaccggcgatgtcggcctgatc
gacgcggacggctatatccgcatcgtcgaccggctgaaggacatgatctccgtcggcggg
ttcaaggtgttcccgagccagatcgaggcgatcctctaccaccaccccgccgtgaaggag
gccttggtgatcggcatccccgatgcctatcatggcgagaatcccaaggccttcgtcacc
ctccaccccggaagcgaggccgtgacgggcgaggcgctgcgcgcatggctgaacccgcag
gtcggcaagcatgagcgcgtcgtcgcggtcgagatccgcgagagcctgccccacacgctg
gtcggcaaactgagccgcaaggaactggtggccgaggagcgcgcccgcgccgaagcgagc
gcaaaggccgcaacgccggcttga
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