Sphingomonas sp. MM-1: G432_14500
Help
Entry
G432_14500 CDS
T02498
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphm
Sphingomonas sp. MM-1
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphm03032
]
G432_14500
03400 DNA repair and recombination proteins [BR:
sphm03400
]
G432_14500
Enzymes [BR:
sphm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G432_14500
DNA replication proteins [BR:
sphm03032
]
Prokaryotic type
DNA Topoisomerases
G432_14500
DNA repair and recombination proteins [BR:
sphm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G432_14500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
AGH50619
UniProt:
M4S7Y4
LinkDB
All DBs
Position
complement(3051723..3052742)
Genome browser
AA seq
339 aa
AA seq
DB search
MLHYVDDADPGITRQRIGPDGAQTRWAYFDARGRRITRRAEIDRLNAIALPPAYVDAWFC
PRPNGHIQAIGWDERGRKQYRYHPDFRAARDAAKYDRCADFGRALPAIRAAVERDLARPT
LGRDRVVAAVVRLLDLGRVRVGNEAYAKANRSFGATTLRHRHANVRGHSIHLEYMGKSGK
LRRLSIRDARLSRLVRRCQDLPGQHLFQYLDADGTPCPVTSGDVNDYLRRVSGGDFTAKH
FRTWGASVIAFGALIAAGGHISLKTMLAPVAEALGNTPAIARKSYVHPALIELAGNRGDS
PLAGLKLPRRTKYLSSLERGLIAFLDNLADPPETISKAA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgctccattatgtcgatgatgccgatcccggcattacccgccagcggatcgggccggat
ggagcgcagactagatgggcctatttcgacgccaggggccgccgcatcacccggcgggcg
gaaatcgaccggctgaacgccatcgcgctgccgccggcctatgtcgatgcctggttctgc
ccccggccgaacggccatatccaggcgatcggctgggacgaacgggggcgcaagcaatat
cgctatcaccccgatttccgcgcggcgcgcgatgccgccaaatatgatcgctgcgccgat
ttcggccgcgcgcttcccgcgatccgcgccgccgtggaacgcgatctcgcccggcccacg
ctgggccgggatcgcgtggtcgcggccgtcgtccgcctgctcgaccttggccgcgtccgc
gtcggcaacgaagcctatgcgaaagccaatcgcagcttcggcgccaccaccctgcgccat
cgccacgccaatgtgcgcggccacagcattcacctggaatatatggggaaatccgggaag
cttcggcggctctccatccgggatgcacggctcagccggctggtgcggcgctgccaggac
ctgcccggccagcatctgttccaatatctcgacgccgatggcacgccctgccccgtcacc
tcgggcgacgtgaatgattatctgcgccgggtgagcggcggcgatttcaccgccaagcat
ttccgcacctggggcgccagcgtcatcgccttcggcgcgctgatcgcggccggcggccac
atatcgctgaagacgatgctggcgcccgtggccgaggcgctgggcaacacccccgcgatc
gcgcgcaaatcctatgtccaccccgccctgatcgaactggcgggaaatcggggagattcg
cccctcgcggggttgaagctgccccgccgcacgaaatatctctcgtcactggaacgcggc
ctgatagcctttctcgacaatctcgccgatccgcccgaaaccatatcgaaggcagcctga
DBGET
integrated database retrieval system
