Sphingomonas sp. MM-1: G432_15540
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Entry
G432_15540 CDS
T02498
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
sphm
Sphingomonas sp. MM-1
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphm03032
]
G432_15540
03036 Chromosome and associated proteins [BR:
sphm03036
]
G432_15540
03400 DNA repair and recombination proteins [BR:
sphm03400
]
G432_15540
DNA replication proteins [BR:
sphm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
G432_15540
Chromosome and associated proteins [BR:
sphm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
G432_15540
DNA repair and recombination proteins [BR:
sphm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
G432_15540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Tail_completion_gp17
HU-DNA_bdg
DUF3852
SSPI
Motif
Other DBs
NCBI-ProteinID:
AGH50826
UniProt:
M4S4X6
LinkDB
All DBs
Position
3271492..3271767
Genome browser
AA seq
91 aa
AA seq
DB search
MNSTDLADGIAKTQGLTKAQAKAIVDQVLQAITDAAVAGEEVSLPGFGKFKVQARPEREG
RNPRTGETMKIAASKKLGFQPAKALRDALNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaccgatctcgccgacggcatcgccaagacccagggcctgaccaaggcgcag
gccaaggcgatcgtcgatcaggtcctgcaggcgatcaccgatgcggctgtcgccggcgag
gaagtgtcgctgccgggcttcggcaagttcaaggttcaggcccgtccggagcgcgaaggc
cgcaacccgcgcaccggcgagacgatgaagatcgccgcttcgaagaagctgggcttccag
ccggcgaaggcgctgcgcgacgcgctgaacgcctga
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