Sphingomonas sp. MM-1: G432_15635
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Entry
G432_15635 CDS
T02498
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
sphm
Sphingomonas sp. MM-1
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphm03032
]
G432_15635
03036 Chromosome and associated proteins [BR:
sphm03036
]
G432_15635
03400 DNA repair and recombination proteins [BR:
sphm03400
]
G432_15635
DNA replication proteins [BR:
sphm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
G432_15635
Chromosome and associated proteins [BR:
sphm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
G432_15635
DNA repair and recombination proteins [BR:
sphm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
G432_15635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
ClpB_D2-small
HU-CCDC81_euk_1
DUF4732
Motif
Other DBs
NCBI-ProteinID:
AGH50845
LinkDB
All DBs
Position
complement(3295796..3296074)
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQLLSKDNPGLSAAEVERIVSIFFEEIAERLKEDGRVELRGFGAFSTRARVART
GRNPRTGESVKVDAKRVPYFKPGKEMRARLNV
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatcggaactcgtacaattactctctaaggataatccgggtctttcggctgcg
gaagtcgaacggatagtcagcatcttcttcgaggagatcgctgaacgactgaaggaagac
gggcgcgtcgagctgcgcggcttcggtgccttttccacgcgcgcgcgcgttgctcgcacc
ggccgcaacccccgcaccggggaatcggtgaaggtggatgccaagcgcgtgccctatttc
aagccgggcaaggagatgcgcgcgcgcctcaatgtgtag
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