Sphingobacterium sp. B29: BV902_00190
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Entry
BV902_00190 CDS
T04670
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphn
Sphingobacterium sp. B29
Pathway
sphn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BV902_00190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphn03400
]
BV902_00190
Enzymes [BR:
sphn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BV902_00190
DNA repair and recombination proteins [BR:
sphn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BV902_00190
Prokaryotic type
BV902_00190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APU99534
LinkDB
All DBs
Position
complement(38648..39322)
Genome browser
AA seq
224 aa
AA seq
DB search
MEKQYDDSWAPVLKPLFGQPYMKQLSTFVQEERQKTKVFPPADLVMNAFKLTPLDQVKVV
ILGQDPYHNDGQAHGLSFSVPEGIALPPSLKNIFKELQDDIPGFVEPRAGDLTYWAKQGV
LLLNATLTVQAHLAGSHQKKGWEIFTDSIIHAISERCEHVVFLLWGSYAQKKSVLIDAKK
HLVLTAVHPSPLSVYRGFFGSKHFSRANQYLMEHGKAPIDWRLV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaatacgatgattcttgggctcctgtgctaaagcctttgtttggtcagcct
tatatgaaacagctgtctacttttgtgcaagaagagcgtcagaaaacgaaagtgtttcca
ccggcagatctggtgatgaatgcttttaagctgacgccattggaccaggtaaaagtagtt
atcttagggcaggatccttaccataatgatgggcaggcgcacggcttgtctttctctgtg
ccagaagggattgctttgccgccatccttaaaaaatatctttaaggaattgcaagacgat
atacccggttttgttgagccgcgtgctggcgatttgacctattgggccaaacagggtgta
ctgttgttaaatgcgacattgacagtgcaggcgcatctggcaggctcccatcagaagaaa
ggttgggagatttttacagatagtattattcatgccatttcggagcgttgtgaacatgtc
gtatttctgttgtggggaagttatgcccaaaagaaaagtgtgctcatcgatgcgaagaag
catcttgtgctaacggcggttcatccatcaccgttatctgtctatcgtggtttttttggt
agtaagcatttttcacgtgcaaaccaatatttgatggaacacggtaaagccccaattgat
tggcgcctggtttaa
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