Sphingobacterium sp. B29: BV902_01690
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Entry
BV902_01690 CDS
T04670
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphn03400
]
BV902_01690
DNA repair and recombination proteins [BR:
sphn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BV902_01690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA
DUF7125
Lon_C
AAA_22
AAA_24
AAA_16
AAA_14
AAA_5
nSTAND3
nSTAND_NTPase5
ABC_tran
CobU
SLFN-g3_helicase
NTPase_1
NACHT
RNA_helicase
DZR
Elong_Iki1
AAA_18
NPHP3_N
Rad51
Hrs_helical
zf-C2H2_7th_ZNF462
DAP3
A2L_zn_ribbon
RUBY_RBDX
DUF7129
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
APU95199
LinkDB
All DBs
Position
372193..373578
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AA seq
461 aa
AA seq
DB search
MAKSKSAYFCQNCGYESPKWMGQCPSCKQWNSFVEEVVEKTSSKVPEWRSSTTGGSTKRA
NKAAIIHEIVYQDELRILTPDQEFNRVLGGGIVPGSLVLIGGEPGIGKSTLMLQLALSIP
QVKTLYISGEESEQQIKMRAERLSQSSKANCYILTETSTQNIFKQIETVQPNVIVIDSIQ
TLHSAQIESAPGSVSQVRECTAELLRFAKETSTPVFIVGHITKDGSIAGPKVLEHMVDTV
LQFEGDRHHVYRILRAVKNRFGSASELGIYEMQGSGLREVSNPSEIMISQRDEPVSGVSI
AAMLEGVRPMMIEVQALVSNSAFGNAQRSSTGYDTKRLNMLLAVLEKRFGFRLSAQDVFL
NIAGGLRVEDPAIDLAVVVAIISSQQDIAIRSNLTFAGEVGLSGEIRAVNRIEQRIQEAE
KLGFDGIFISKFNTKGLDAKKYNIAIRPVAKLEDIFSALFG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcaaaatcagcatacttctgtcaaaactgtggctacgaatctcccaaatgg
atgggacaatgcccttcttgcaagcaatggaatagttttgttgaggaagtcgtcgaaaag
acgagttcaaaagtgcccgaatggcgtagttctaccacaggcggaagcacgaaaagagcg
aataaagctgcaatcattcacgagattgtctatcaggatgaattacggatattgactcct
gatcaggaatttaaccgggttcttggtggtggtatcgttccgggttcattggtacttatc
ggaggcgaacccggtattgggaagtctacgttgatgttacagctcgctttatcgatccca
caagtcaagacactttatatttctggggaagaaagcgaacagcaaattaagatgcgggca
gagcgattgtcacaatcttctaaagcaaattgttatatccttaccgagacatcgactcaa
aatattttcaagcagatcgagacggtacagcctaatgtcattgtcatagattctatacag
actttacattccgcacaaattgaatcggcaccagggtcggtttctcaggtacgcgagtgt
accgcagaactgctgcggtttgcaaaggaaaccagtacaccggtttttattgtagggcat
attaccaaggacgggtctattgcaggtcccaaggttttagaacatatggtggatacagtg
cttcaattcgaaggggatcgtcatcatgtataccgaattttacgggccgtaaagaatcgt
tttggatctgcttcagaactgggtatttatgaaatgcaggggtcggggcttagggaagtg
tcaaatccttcggagattatgatttcccagcgcgatgaacctgttagtggcgtttccatt
gcggcgatgctcgaaggagtgcggcctatgatgattgaagtacaggcactggtgagtaat
tcggcgtttggaaatgcacagcgctcttctacaggttacgatacgaagcgattaaatatg
ctgctggctgttttggagaaacgctttggctttaggttaagtgcacaggatgtatttttg
aatattgccggtgggttgcgtgttgaagatcctgcgatcgatttggctgttgttgttgca
attatttcttcacaacaagatatcgcgattcgatccaatctgacttttgccggtgaggtt
ggtttatcgggtgagataagggccgtaaatcgcattgaacagcgtatacaggaggccgag
aaattgggcttcgatggtatttttatttctaaattcaataccaaaggattggatgctaaa
aaatataatattgccattcgtccggttgccaaattggaggacatcttcagtgctttgttt
ggctaa
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