Sphingobacterium sp. B29: BV902_03630
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Entry
BV902_03630 CDS
T04670
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sphn
Sphingobacterium sp. B29
Pathway
sphn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BV902_03630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphn03019
]
BV902_03630
03110 Chaperones and folding catalysts [BR:
sphn03110
]
BV902_03630
03029 Mitochondrial biogenesis [BR:
sphn03029
]
BV902_03630
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphn04147
]
BV902_03630
Enzymes [BR:
sphn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BV902_03630
Messenger RNA biogenesis [BR:
sphn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BV902_03630
Chaperones and folding catalysts [BR:
sphn03110
]
Heat shock proteins
HSP60 / Chaperonin
BV902_03630
Mitochondrial biogenesis [BR:
sphn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BV902_03630
Exosome [BR:
sphn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BV902_03630
Exosomal proteins of other body fluids (saliva and urine)
BV902_03630
Exosomal proteins of breast cancer cells
BV902_03630
Exosomal proteins of colorectal cancer cells
BV902_03630
Exosomal proteins of bladder cancer cells
BV902_03630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
APU95533
LinkDB
All DBs
Position
865716..867353
Genome browser
AA seq
545 aa
AA seq
DB search
MAKQVKYNVEAREALKKGVDTLANAVKVTLGPKGRNVIIEKKFGAPVITKDGVSVAKEIE
LKDALENMGAQMVKEVASKTADQAGDGTTTATVLAQAIVAPGIKSVAAGANPMDLKRGID
KAVATVVANLKSQSQEVGQDNNKIKQVATISANNDEVIGALIAQAMEKVGNDGVITVEEA
KGTETEVKTVEGMQFDRGYLSPYFVTNSDKMEAELDNPYILIYDKKISNMKELLPILEKQ
VQTGKPLLIIAEDLDGEALATLVVNKIRGSLKVAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFKLENAELSYLGQAEKVQVDKDNTTIINGSGNVEDIKARVAQIRSQIETTTSDY
DREKLQERLAKLSGGVAVLYVGATTEVEMKEKKDRVDDALHATRAAVEEGIIAGGGVAFI
RSTEALVNLKGDNEDEQIGIDIIKRAIEEPLRQICNNAGIEGAVIVQKVKEGTADFGYNA
RTDRYENLIAAGVIDPTKVSRVALENAASVASMLLTTECVLADEAEENPVGAGAPPMGGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagtaaaatataacgttgaggctcgcgaggcccttaaaaaaggtgtagat
actttagcgaatgcagttaaagtaacattaggtcctaaaggacgtaacgtaattattgag
aaaaaatttggtgctccagtaattactaaagatggtgtttcggtagcgaaagaaatcgaa
ttgaaagacgctttagaaaatatgggtgcacaaatggtaaaagaagtagcttccaaaacg
gctgatcaagctggtgatggtactacaactgctactgtattagcacaagcaatcgttgct
ccaggtatcaaatctgttgcggctggagctaatccaatggatctaaaacgtggtattgac
aaagctgttgcaactgttgttgctaacttgaaatctcaatctcaagaagttggtcaagac
aataataaaattaaacaagttgctactatttcagcgaacaatgacgaagtaattggtgct
ttgatcgctcaagcaatggaaaaagtaggtaacgacggtgttatcactgttgaagaggca
aaaggtactgaaacagaagtaaaaactgtggaaggtatgcaatttgaccgtggttattta
tcgccatattttgtgacaaattctgacaaaatggaagcggaactagataacccatacatc
ttgatctacgacaagaaaatcagtaacatgaaagaattgttgcctatcttggagaaacaa
gttcaaactggtaaaccattattgatcattgctgaagacttagatggtgaggcacttgca
acattagttgttaataaaatccgtggttcgttgaaagttgcagctgttaaagctccaggt
ttcggtgaccgtcgtaaagcaatgttagaagatatcgctatcttaactggtggtactgtt
atctctgaagaaagaggtttcaaattagagaatgctgagttatcttacttgggtcaagct
gaaaaagttcaagttgacaaagataacacaactattatcaatggttctggtaatgtagag
gatatcaaagcacgcgttgctcaaatccgttcacaaatcgaaacaacaacttctgattac
gatcgtgaaaaactacaagaacgtctggcaaaattgtcaggtggtgtagctgtgttatat
gtaggtgcgactactgaggttgaaatgaaagagaaaaaagaccgtgttgatgatgcttta
catgcaactcgtgcagctgttgaagaaggtattatcgctggtggtggtgttgcattcatt
cgctcaactgaagccttggtaaaccttaaaggtgacaacgaagatgagcaaatcggtatt
gacatcattaaacgcgctatcgaagagccattacgtcagatctgtaataacgctggtatt
gaaggtgcagtaatcgttcaaaaagtgaaagaaggaactgcagatttcggttacaacgca
cgtacagaccgttacgagaacttaatcgctgctggtgtaattgatccaactaaagtatct
cgtgtagcattggaaaatgcagcttcagttgcttcaatgttattgactaccgagtgtgtc
ttagctgacgaagctgaagaaaaccctgtaggtgctggtgctcctccaatgggtggcggt
atgggtggaatgatgtaa
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