Sphingobacterium sp. B29: BV902_04095
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Entry
BV902_04095 CDS
T04670
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sphn
Sphingobacterium sp. B29
Pathway
sphn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BV902_04095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphn03021
]
BV902_04095
03400 DNA repair and recombination proteins [BR:
sphn03400
]
BV902_04095
Enzymes [BR:
sphn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BV902_04095
Transcription machinery [BR:
sphn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BV902_04095
DNA repair and recombination proteins [BR:
sphn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BV902_04095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
APU95616
LinkDB
All DBs
Position
968248..969240
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQRPDKVIMQKSTDFDGTFEFRPLEPGFGVTIGNALRRILLSSLEGYAITSIRFS
GVSHEFSTIKGVVEDVTEIILNLKQIRFKKTGEIGDNEKVFVVINGQEQFLAGDITKFSN
NFTVLNPDMVICNMDNSVTIELELSIAKGRGYVNADENKVVDAPVGVIAIDSIFTPIKNV
KYTIENYRVEQKTDYEKLLLDISTDGSIHPEEALKEAAKILIQHFILFSDENMLLESQTK
EETKVVDEEILHMRKILKTELVDLDLSVRALNCLKAADIRTLAELVTYDVADMLKFRNFG
KKSLSEIQELVKSKGLSFGMNLAKYKLDEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttagcatttcaaagaccggataaagttatcatgcaaaaatctacggatttt
gatggtacgtttgaatttcgtccattggagcctggttttggtgtaaccattggtaatgct
ttgcgccgtattctattgtcctctttagaaggatatgcaattacgtcgataaggttttct
ggcgtttcgcacgaattttcaacgatcaaaggtgttgttgaagacgtaactgaaattatc
ttgaacttgaaacaaattcgtttcaaaaaaacaggtgagattggtgacaacgaaaaggta
tttgtagtaatcaatggtcaagagcagttcttagctggtgatatcacaaaattctctaat
aactttacggtcttaaacccagacatggtaatctgtaacatggataattcagtgacaatt
gaattggaattgagtattgccaaaggtcgtggatacgtaaatgctgatgagaataaagtt
gttgatgctccagtaggtgttatcgcaatcgattcgatctttactccgatcaagaatgtt
aaatataccattgagaattaccgtgtagagcaaaaaactgactacgagaaattgttgttg
gatatctctactgatggctcaattcaccccgaagaagctttgaaagaagctgctaagatc
ttaattcaacactttattttattctctgatgagaatatgcttcttgagtctcaaacgaaa
gaagaaactaaagttgttgacgaagaaatcttacatatgcgtaagatcttgaaaacagaa
ttagtagatcttgatctttcagttcgtgcattgaactgtttgaaagctgcggatattcgc
acattggctgagttggtaacttatgacgtagctgatatgttgaaattcagaaacttcggt
aaaaaatcgttaagcgaaatccaagagttggttaaatcgaaaggtttatcattcggaatg
aacttggcaaaatacaaattagacgaagaataa
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