Sphingobacterium sp. B29: BV902_04800
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Entry
BV902_04800 CDS
T04670
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphn03016
]
BV902_04800
Enzymes [BR:
sphn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
BV902_04800
Transfer RNA biogenesis [BR:
sphn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BV902_04800
Prokaryotic type
BV902_04800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_4
Lactamase_B
EFG_IV
DUF745
Motif
Other DBs
NCBI-ProteinID:
APU95740
LinkDB
All DBs
Position
1121352..1122263
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AA seq
303 aa
AA seq
DB search
MKFEVLILGNSSATPMFDRHPTSQVLNFNEQLFLIDCGEGTQMQLSRYGIKSNRIGHIFI
SHLHGDHYLGLVGLLSSMHLVGRKSDLHLYGPPALKEILDVQFLHSETILRYNLIFHPIS
PEQPGVIFENRTLKVSAFPLKHRIACTGFRFDEGPRARTLLGDVVQELNIPTAYFPMIKK
GFDYVDETGTVYRADDLSLPAPLSRSYVYCSDTVRTPDYLPYVQKANLMYHESTFLHDMV
DRAKETFHTTALEAGEIAQETHAKKLLLGHYSARYRDLNPLLEEARTVFPNTELSVEGRW
FSV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaagttctgatattgggaaatagctcggcaacgccgatgtttgatcgtcat
ccgactagccaagtgctgaactttaatgagcaattgtttttgatcgactgtggagaaggc
acacaaatgcaactcagccgatacggcatcaaaagcaatcgcataggacatatatttatt
agccatttgcatggggatcattatttgggcttggtggggctgctttcatcgatgcacctt
gtcggccgaaaaagtgatctccatttgtatggcccgcctgcgttaaaggaaattttagac
gtgcagtttttgcattccgagactatcttacgctataatcttatttttcatccgatttca
ccagaacagcctggcgttatttttgaaaacagaacattaaaagtaagtgcttttccatta
aagcatcgtattgcctgtaccggctttcgttttgatgagggaccccgcgcgcgaacattg
ttgggcgatgtcgtgcaggaattaaatatacctaccgcctattttccgatgatcaaaaaa
ggatttgattacgtcgatgaaaccggtacagtatatcgtgcagacgacctgagccttcct
gctcccttatcgcgcagttatgtgtattgttcggataccgtacggacgccagactatctg
ccttatgtgcaaaaggctaatctgatgtatcatgagtctacattcttacacgatatggtt
gatcgcgcaaaagagacgtttcacacaacagcgctggaagctggagaaatcgcccaggaa
acgcatgcaaagaagttgctattaggtcattattcagctcggtacagagatttaaatccc
ctattggaagaagcgagaactgtattcccaaatacggagctctctgtggaaggtagatgg
ttttccgtctag
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