Sphingobacterium sp. B29: BV902_07695
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Entry
BV902_07695 CDS
T04670
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphn02000
]
BV902_07695
Transporters [BR:
sphn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BV902_07695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_19
TPR_12
TPR_14
TPR_2
Motif
Other DBs
NCBI-ProteinID:
APU99657
LinkDB
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Position
1860073..1861713
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AA seq
546 aa
AA seq
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MKNIITTSLGLIVLFTLGGCKKFLEEELKTELAPSNTYTSTYGFEVGSAGLYTLTRSEYN
TYGEGGAFIHNGACPYEALQVSTDIADAINSDGSLTAFANLTLTASERFVGTYWNWAYNL
ISSANLMLVYSEKNTNWDTPQDKARFQAEARFFRAYAYRTLVYLYGDVPYVETILYDFQL
NFTRTPKAEVIGHMVDDLKFAVDNLPTNPDDVKEGKLTKWAASHLLSEIYLLQGNHAEAE
KAALAVINSGYYNLMKNRYGVNGSKPGDVFSDLFLENNQNRKSGNKESIWVLQFQFNTIG
GGTNSDDWTRRAWIPNYSTITGFVLADTLGGRGIAQLVPMKWWVGTTGTNATGNVAGIFE
ANDIRNSGYNIKRNWYYNNANETSLYGKKANITEQTWFTTKSLFPAITKFFYGRTENLSL
TGSYKDRMKFRLAETYLLLAEAYLGQNMPDKAAQAVNEVRKRAGASEITGAQMNMDFLLD
ERIRELVGEESRRFTLVRTNTLVERVKKYNNAIKDKITDNNILWPIPQVIRDANTGAPFP
QNPGYN
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatattatcacaacaagtttagggcttatcgtattgttcaccttaggaggctgt
aaaaagtttctggaagaagagctaaaaaccgaactggccccctccaatacctataccagc
acctacggtttcgaggtggggagtgctggtttgtatacactcacacgttcagaatacaat
acctatggcgaaggtggcgccttcatccataatggtgcctgcccatatgaagctttacag
gtatctacagatatcgccgatgccattaatagcgatggctcactgacggcttttgcaaac
cttacacttactgcctcagaacggtttgtgggtacttactggaattgggcttacaacctc
atttcatcggcaaacctgatgctggtttattccgaaaaaaataccaattgggatacgccc
caagataaagcacgttttcaggctgaagcccgcttctttcgggcatatgcttaccgtacc
ttggtttatctctatggcgatgtaccctatgtagaaactatcctgtatgattttcagctt
aattttacccgtacaccaaaggccgaagtcatcggccacatggtagacgacctgaagttt
gcggtggataacctgcctacaaatccggacgacgtaaaagaaggaaagctgaccaaatgg
gccgcaagtcatttgctgagcgaaatctacctattgcagggcaatcatgccgaagcagaa
aaggccgcattggcggtcatcaatagtgggtattataaccttatgaaaaacagatatggc
gtaaatggcagcaaaccaggcgatgtatttagcgatttatttctggaaaataaccaaaat
agaaaaagtggcaataaagaaagtatctgggtattgcagttccagtttaacacgatcggt
ggtggtaccaattcggatgactggacgcgtagggcttggataccaaattactcgacgatt
acaggatttgttttggctgacacattgggcggccgtggtattgcacaattagtgccaatg
aagtggtgggtaggcaccacaggtaccaatgctacaggcaatgtcgctggtattttcgaa
gcaaatgatatccgtaattcaggttataacattaaacgcaactggtattacaacaacgcg
aatgagacctcgctatatggtaaaaaagccaatattaccgaacagacctggtttacgaca
aaaagcttatttccagcgattacaaaattcttttacggacgtactgaaaatttaagtttg
accggtagttataaagatcgtatgaaattccgtttggctgaaacctatctgttgcttgct
gaagcctatttggggcaaaatatgccggataaagctgcccaagccgtcaatgaagtgcgg
aaaagagctggagcgtccgaaattaccggcgctcagatgaatatggatttcctgctcgat
gagcgtatccgtgaattagttggtgaagaaagcagaagatttaccctggtgcgtaccaat
actttggtggagcgggtcaaaaaatataataatgcgatcaaggataaaattacggacaac
aatatcttatggcctattccacaggtgatcagggatgccaatacaggggcaccgttcccg
cagaatccgggttataattaa
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