KEGG   Sphingobacterium sp. B29: BV902_13775
Entry
BV902_13775       CDS       T04670                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sphn  Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:sphn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphn03400]
    BV902_13775
Enzymes [BR:sphn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BV902_13775
    5.6.2.6  RNA 3'-5' helicase
     BV902_13775
DNA repair and recombination proteins [BR:sphn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BV902_13775
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: APU99764
LinkDB
Position
complement(3301885..3304335)
AA seq 816 aa
MAHSEGFRIVNNYFESQGNVPFSFQTKAWEKYAQGYSGLVIAPTGFGKTFSLFMAVLIDF
LNNPDQHQKGLKLLWVTPLRSLAKDLARAMQKAIDDIGLDWVVQVRNGDTNPKVKAQQTR
SMPDILLVTPESLHLLLAQKQRDKYFKNLRCITVDEWHELMGNKRGVMVELALAFLKSHY
KKMRVWGITATIGNLEEAMEVLLPTEKKRIQIVAKEKKKIAIKPIYPSKVELLPWAGHLG
GNLADQVVPIILQSKSTILFTNTRSQSEMWYQLLLQAHPDFAGQIALHHSSIDANIREWI
EDNLSSGKLKAVVSTSSLDLGVDFKPVDTVIQIGSSKGVARFMQRAGRSGHSPFETSTIY
FVPTHSLELIEVAALKEAVKTQTIENRDPMVQTFDVLVQFMVTIALGGGFRSEELHAIVA
NTHAFRYMDQEEWQWCMYFITAGGKIGKRYEEFHKVIQDEEGKWIIKNRRLALLHRLNIG
AIVGDAMMRVKFLSGGYIGMIEEYFISKLKKGERFILAGRVLELVMVKEMTVFVRNSSGK
AITPSWLGGRLPLSSNLSHFLRKKLAAATGAPSSEKELHFLAPLIEKQTELSAVPSEAEF
LVEHIKTREGHHLFFYPLEGRLIHEVMAALVAYRISKLYPISFSMAMNDYGFELYSDKDI
QLSQSQLEEVLSRKNLMEDVTSSINSAEMASRKFRDIAVISGLVVQNYPGTQQNNKSLQA
SSGIIFKVLMEHDPSNLLLKQAFSEVFNQQLEEYRLIKAFDRINNSKIRYTFVEEYTPLS
FPIKVDSLRQSLSSEALIERIQRMEKANMQKKKRRK
NT seq 2451 nt   +upstreamnt  +downstreamnt
atagcacatagtgaaggatttcgaattgtcaacaattatttcgaatcccagggaaatgtt
ccctttagctttcagaccaaggcctgggagaaatacgcgcagggatatagcggactagtt
attgcaccaacaggatttggaaaaaccttttcgttatttatggcggtactgatagacttt
cttaataacccggatcagcaccaaaagggtttgaagctactttgggtaacacccttacgc
tcgttggctaaagatcttgcacgagcaatgcaaaaggccatagacgatattgggctggac
tgggtcgttcaggttcgcaatggcgacaccaatccgaaagtaaaagcgcaacagacgcga
tcgatgcccgatattctgctcgtcacacccgaaagtcttcatttgctgctcgcacaaaaa
caacgggataagtatttcaaaaatctccggtgtatcacggtggacgaatggcatgaactg
atgggcaacaaacgtggtgttatggtcgaactggcgctcgccttcctcaagtcgcactat
aaaaagatgcgcgtttgggggatcactgccaccataggcaatctcgaggaagctatggag
gtcctgttgccaacagaaaaaaaacgtatccaaattgtcgctaaagagaaaaagaagata
gcgatcaaaccaatttaccccagcaaagtagaactattgccttgggcaggacacctcggt
ggcaacctagcagaccaggtcgtccccattatactccagagcaaaagcacaatcttattt
accaacacacgcagccaaagcgaaatgtggtatcagctccttttacaggcacatccagat
tttgccggacaaatcgccttacaccacagctctattgatgccaatatccgcgaatggatc
gaagataatctcagcagcggcaaacttaaagcagttgtatcgacctcttccttggactta
ggggtagatttcaaacccgttgatacagtcatccagattggctcgagtaaaggtgtagcc
cggtttatgcaacgcgctggaagaagcggccatagccctttcgaaacctctacgatttat
ttcgtccctacgcactccctggagctcatcgaggtcgccgcactgaaggaggccgtaaaa
acgcagacgatcgaaaaccgggatcctatggttcaaactttcgatgtgcttgttcaattc
atggtaaccatcgccctgggtgggggatttcgttcggaagaactgcatgcaatcgtcgcc
aatacccatgcctttcgctatatggatcaggaagaatggcaatggtgcatgtattttatt
accgcagggggaaaaattggcaaacgctacgaagaatttcacaaggttatccaagatgaa
gaaggtaaatggatcatcaaaaatcgtcgcctggcacttctgcatcgactcaatataggc
gctattgtaggggacgccatgatgcgcgtgaagttcctctccggtggttatatcggcatg
atcgaagaatattttatcagtaaactcaaaaaaggcgagcgatttattcttgcgggacgc
gtcctggaacttgtgatggtcaaggaaatgaccgtattcgtaagaaactcgtcgggtaaa
gccattactccaagctggctcgggggtagacttcccttatcgtccaatttaagccatttc
cttcgtaaaaaattggctgcagcaacaggagctccttccagtgaaaaagagcttcatttc
ctggcaccattgatcgaaaaacagaccgaactttcggccgtgcctagcgaagcggaattt
cttgtcgaacatatcaaaacaagagaaggacatcatctctttttctaccctttggagggt
agactgatccatgaggtcatggcagcgctcgtcgcctatcgcatcagcaaattgtacccc
atcagtttctctatggcgatgaatgattatggttttgaactctattccgacaaggacatc
caactgagccaatcacagctcgaagaggtcttgagccgtaaaaatctgatggaagatgtt
accagcagcatcaactccgcagaaatggccagccgtaaatttagagatattgctgtcatt
tcgggattggtggttcaaaattatccgggtacacagcaaaacaataaatccctacaggct
tcatccggaattattttcaaggtattaatggagcacgacccgagcaacctactcctcaaa
caagcttttagcgaagtgttcaaccaacaattggaagaatatcgtttaataaaagcattc
gacaggataaacaatagtaaaatacgttatacctttgtcgaagagtacacgccactgagc
tttccgatcaaggtcgatagcctgcggcagtcgctgtcgagtgaagcactgatcgagcgt
atccaacggatggaaaaggccaacatgcaaaaaaagaaacgtagaaaatga

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