Sphingobacterium sp. B29: BV902_15375
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Entry
BV902_15375 CDS
T04670
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sphn
Sphingobacterium sp. B29
Pathway
sphn03030
DNA replication
sphn03430
Mismatch repair
sphn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BV902_15375
03430 Mismatch repair
BV902_15375
03440 Homologous recombination
BV902_15375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphn03032
]
BV902_15375
03400 DNA repair and recombination proteins [BR:
sphn03400
]
BV902_15375
Enzymes [BR:
sphn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BV902_15375
DNA replication proteins [BR:
sphn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BV902_15375
DNA repair and recombination proteins [BR:
sphn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BV902_15375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
APU97542
LinkDB
All DBs
Position
complement(3643160..3644620)
Genome browser
AA seq
486 aa
AA seq
DB search
MSVNQSKRQEFAIVDIETTGGNAKSSRITEVAIVIHDGNQVLERWETLVNPGKEIPNSIF
ALTGINNDMVKDAPLFDEVAEQIYEMLKDRIFVAHNVNFDYSFIRFQLQESGFEWSAIKL
CTVRYARKIKPGLLSYSLGRLCDYLDIPIENRHRAGGDADATAILFAYLKVLDTEQVFQD
MIKHKALDQRFPPHLNPLEYEQLPNEAGVYYFHDKAGKVIYVGKAVNIKKRVLSHFTGNN
IQAQRQHFLKEIHHISYECCGTELMSLLLECAEIKKFWPKYNRALKRYEPKFGLFSYEDQ
NGYLHLAIGKTTRGQECIQLFQREYDAIQLLQNFIQHDAINPQFCQFGHASLSTKALKKT
ELPDRDLHNTRVERCIEDWLKQQPSFVLIDKGRNSDEKSCIVIENGVFYGMGYIDQYGQY
SGFEDIKGQVKRYQSNHYMMELVKMAAERHPAKIHFLTKSKILPDVAAEPDFSYEKLAPN
SLFNFF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaatcaaagcaaaagacaagaatttgccattgtggacatagagactacaggt
ggcaatgcaaaatcgagcaggatcacagaggttgccattgttattcatgatggtaatcag
gttttggaacgttgggagaccttggtgaatccagggaaagagattccgaattcgattttt
gcgcttacgggtataaacaatgacatggtgaaggacgctccattatttgatgaagtagcc
gagcagatttatgaaatgctcaaagaccgtatttttgttgcacataatgtaaattttgat
tattcattcattcgatttcagcttcaggaatcgggcttcgagtggtcggcgattaaattg
tgtacagtacgctatgcgcgaaaaataaagccgggattattgtcctatagcttggggcga
ttatgtgattatttagatatcccgattgaaaataggcaccgtgcaggtggcgacgccgat
gcaacagccattctctttgcttatttgaaagtgctagataccgaacaggtatttcaggat
atgattaaacataaagcgctagatcaacggtttccaccgcatttaaatcccttggagtat
gaacaattgcccaacgaggctggagtctattattttcacgacaaagctggaaaagtaatt
tatgttggcaaagccgtcaatataaaaaaaagagtattgtctcattttacagggaataat
attcaagcgcaaaggcaacatttcttaaaggaaattcatcatataagttatgagtgctgc
gggacagagctgatgtcattgttgttggaatgtgcggaaatcaaaaagttctggccaaaa
tataatagagcacttaaacggtatgagcctaaattcggtttgttttcttatgaggatcaa
aatggctatctccatctggctattgggaagacgacaaggggacaagaatgtattcagttg
tttcagcgcgaatatgacgctattcagttgctgcaaaactttattcagcatgacgctatt
aatccgcaattttgtcagtttgggcacgccagtttgtctacgaaagcgctaaagaagacc
gaattgcccgatcgagacctacacaatacccgggtggaacgttgtatcgaggattggctc
aaacagcagccatcctttgtattgatcgataaaggacgtaattccgatgaaaaaagctgt
atcgtcattgaaaatggtgttttttatggaatgggatatattgatcaatacggccagtat
agcgggtttgaagatataaaaggacaagtaaaaagatatcagagcaatcactacatgatg
gaattggtcaaaatggcagcagaaagacatcccgctaaaatacatttcctaacaaaatca
aagattttacctgatgttgcggcagaacctgatttctcttatgaaaaattggctccgaat
agtctctttaatttcttttaa
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