Sphingobacterium sp. B29: BV902_15470
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Entry
BV902_15470 CDS
T04670
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphn03032
]
BV902_15470
03400 DNA repair and recombination proteins [BR:
sphn03400
]
BV902_15470
Enzymes [BR:
sphn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BV902_15470
DNA replication proteins [BR:
sphn03032
]
Prokaryotic type
DNA Topoisomerases
BV902_15470
DNA repair and recombination proteins [BR:
sphn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BV902_15470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
APU97559
LinkDB
All DBs
Position
3661632..3662606
Genome browser
AA seq
324 aa
AA seq
DB search
MKVKAGYTRKKIGKSFKYFDTSGTEVSDKKILERIMKLVIPPNWKDVWIAKSKTSDLQAF
GFDQKERKQYIYHTKFVDQRQAAKFSNILFMGKYLQELRKISTKHLKKQVWDMDKLCAIA
FKIMDSTLIRIGNKRYTLTNKSYGLSTLEKRHVTIENNTISLAYKGKKGVFQQKSWSNRQ
QAKLLEELLKMKGKRIFQIDSATCESTFCGAAFNQYLRENSTGQISCKSIRIWGASREAF
YQLAQTKQAESLNARKRQLNKVIKHVAEQLGNTKTVSQTYYIHPAIQRLFMEGRFPSIKS
KLPLAKLEDKLYRFLLKHTDKAIV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaaagctggttatacaagaaagaaaataggcaagtcttttaaatatttcgat
acatcaggaacagaagtatctgataaaaagatcttagaaagaattatgaaactggttatt
ccacccaactggaaggatgtatggattgccaaaagtaagaccagtgatctgcaagctttt
ggattcgatcaaaaagagcgtaaacaatatatctaccatacgaaattcgttgaccaacgg
caagcggcaaagttcagcaatattctttttatgggtaaatatttacaagaattaagaaag
atcagcactaaacatctaaaaaaacaggtctgggatatggataaattgtgtgcaattgct
tttaaaattatggacagcacattaattcgtatcggcaataagcgctatacactgaccaat
aagtcatatggcctaagtacactggaaaaaaggcacgtcaccatcgaaaacaacacgata
tctttggcttataaaggtaaaaagggtgtttttcagcaaaagtcatggtccaataggcaa
caagctaagcttttggaagaacttttaaaaatgaaaggaaaaaggatatttcagattgat
agtgctacgtgcgaaagcacgttctgcggtgcggcctttaatcagtatctccgggagaat
tctacaggtcagatcagctgtaaaagcattcgtatttggggagccagtcgagaagctttt
taccagctcgcccaaacaaaacaggctgagtcgcttaatgcccgaaaaagacagttaaac
aaagtcattaaacatgttgctgagcaactcggcaatacaaagactgtttcacagacttat
tatatccatcctgccatacaacgtttatttatggagggaagattccccagtataaaaagt
aaattaccgcttgcgaaattagaggataaattgtaccgttttctgcttaaacacaccgat
aaggcaattgtttaa
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