Sphingobacterium sp. B29: BV902_16535
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Entry
BV902_16535 CDS
T04670
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphn03009
]
BV902_16535
Enzymes [BR:
sphn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
BV902_16535
Ribosome biogenesis [BR:
sphn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BV902_16535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Peptidase_S24
Sec-ASP3
Motif
Other DBs
NCBI-ProteinID:
APU97740
LinkDB
All DBs
Position
complement(3898602..3899345)
Genome browser
AA seq
247 aa
AA seq
DB search
MIQNETRLFKFPKFSELIIHEDENLIVINKPPFVASLDEREGGEVNILRLAKKYHPDAQV
CHRLDKETSGILLIAKNPETYRTISIAFEKRKVNKIYHAIIGGTHTFQDLLVDLPILNQG
NKNVSIDRANGKPAETIFNSIKYYKNYTLVECKPITGRMHQIRIHLATQHAAIVGDDMYR
GKPVYLSQIKKRGYTLSKDEEEQPIMKRFALHSKHVEFELNGVKMAFEAPYPKDFATLLK
LLDKFDS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaaatgagactcgtctatttaaatttcccaaattttcagaattaatcatccac
gaggatgaaaatttgattgttatcaataaaccgccgtttgtcgcttctttagatgaacgt
gagggtggggaggtcaatattcttcgcttagcgaagaaatatcatcctgatgcacaggtg
tgccaccgcctggataaagagacctcgggtattttattaattgcaaaaaatccagaaaca
taccgtacaatttccattgcatttgaaaaaagaaaagtgaataagatttatcatgcaatc
ataggtggtacacatacttttcaggatttgcttgtcgatttgcccatcttgaaccaaggc
aataaaaatgtatctattgatcgtgcaaacggcaaaccggcagagaccatcttcaattcg
atcaaatactacaagaactataccctagtggaatgtaaacccattacaggacgtatgcac
caaatccgtattcacttagcgacacaacatgccgctattgtgggggatgacatgtatcgc
ggtaaacctgtgtatttgtcccaaatcaagaaaaggggatatacattatccaaagatgaa
gaggaacaacccattatgaagcgttttgcgctacattcaaaacatgttgaatttgagttg
aacggagttaagatggcttttgaggcaccttatccaaaggattttgcgaccttgttgaag
ctgttggataagtttgattcttaa
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