Sphingobacterium sp. B29: BV902_19150
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Entry
BV902_19150 CDS
T04670
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphn03016
]
BV902_19150
Enzymes [BR:
sphn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BV902_19150
Transfer RNA biogenesis [BR:
sphn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BV902_19150
Prokaryotic type
BV902_19150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
APU98191
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All DBs
Position
4450420..4451142
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AA seq
240 aa
AA seq
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MENIEVSENSAKFNFAEGEMLLIDKPLTWTSFDVVGKVRNSIKPLKLKVGHAGTLDPLAT
GLLIVCTGKLTKKIDSYQAEDKEYTGSITLGATTPSYDLETEIDQTFPIDHITEEMIFEA
AKSFEGEIQQFPPAHSAIKINGERVYEKARRGEEVEIKSRQVRINSFLIEKIELPNVYFR
ISCSKGTYIRSLAYDFGKILQSGSHLSSLRRTKSGDYSVENAWNLEQLIAEIKRHKEIIK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatagaggttagtgaaaattcagcaaagttcaactttgctgaaggagaaatg
ttgttgatcgataaacctttaacatggacaagttttgatgttgttggtaaagttagaaac
tcaatcaagccattaaaattaaaagtcggtcatgcaggaactctagatccactggcaaca
ggtctactgattgtatgtaccggaaaactaacaaagaaaatagacagctaccaagctgaa
gacaaagaatatacaggttcgatcacattaggagcgacaacgccttcttacgatctggaa
acagaaattgaccaaacctttccaatcgatcacatcacagaggaaatgatcttcgaagca
gcaaaatcctttgaaggcgaaattcagcagtttcctccagcccattcagccataaaaatt
aatggtgaacgcgtctatgaaaaggcccgtcgtggcgaagaggttgaaataaaatcccgc
caggtacgcatcaatagctttctcattgaaaagatcgagcttcccaacgtgtattttcgc
atatcctgttcaaaaggaacctacattagatcattggcctatgactttggaaaaatctta
cagagtggatcacatctgagttctttaagacgcaccaaaagtggagattattcggtagaa
aatgcctggaatctagaacaacttatcgctgaaataaaacgtcataaagaaatcattaaa
taa
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