Sphingobacterium sp. B29: BV902_20465
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Entry
BV902_20465 CDS
T04670
Name
(GenBank) hypothetical protein
KO
K15256
tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphn03016
]
BV902_20465
Transfer RNA biogenesis [BR:
sphn03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
BV902_20465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_12
Methyltransf_25
Methyltransf_23
Methyltransf_11
Methyltransf_31
NodS
Methyltransf_9
Glyco_trans_1_4
TPMT
HTH_18
Motif
Other DBs
NCBI-ProteinID:
APU98420
LinkDB
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Position
complement(4749525..4750211)
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AA seq
228 aa
AA seq
DB search
MNKVELFENERASGYDQFVESWIPNYHYFLDQLPKLLRETENKDLLVVGCGTGNEIERFV
DTAESWTITGVDPSPEMISQALEKFEADENVHLVEGVVSDLDEEKQYGAATLLLVLHFLE
DNGEKLVMLQDISKRMMSQAPLLLLDITGNKEQIQQNLQLLRLLLPKGIDETQVAQRLRR
IEHELLHVSEERLAELCEEAGFEPPVRFFQSSIYMGWITRKKDIISFS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtagaactgtttgaaaatgagcgtgcaagtggctatgaccaatttgttgag
agctggattcccaattaccattattttttagatcagctgccgaagcttctccgagaaact
gaaaataaggatttattggtggtaggatgtggcacaggaaatgaaatagaacgttttgtt
gacacagcagaatcttggacaataaccggggtagatccgtcgcctgagatgattagtcag
gccctggaaaaatttgaagcggacgaaaatgttcatcttgtcgaaggtgtggtaagtgat
ttggacgaagagaaacaatatggtgctgcgacgcttttgcttgtattacattttttagaa
gacaatggcgaaaaattggttatgctccaagatatttccaagagaatgatgtcgcaagca
cccttgttattattagatattacgggcaataaggagcagattcaacaaaacttgcagttg
ttgagacttcttctgcccaaggggatagatgaaacacaggtcgctcaaagattgcgaaga
atcgagcatgaattgttgcatgtctcggaagaacgattagccgagctctgtgaggaagcc
ggatttgaacctcctgttcgattctttcaatcatcgatttatatggggtggataacccga
aaaaaagatattatttccttttcttag
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