Sphingobacterium sp. B29: BV902_20845
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Entry
BV902_20845 CDS
T04670
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphn02000
]
BV902_20845
Transporters [BR:
sphn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BV902_20845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_12
TPR_16
TPR_2
DUF5630
TPR_1
TPR_7
TPR_8
TPR_10
TPR_14
Motif
Other DBs
NCBI-ProteinID:
APU99900
LinkDB
All DBs
Position
complement(4857308..4858669)
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AA seq
453 aa
AA seq
DB search
MTGCEKYVDIKTQGQLTPGTIENYRYLLNNTTALEAAPAVSDMASDDLEIIDGSPQQLSL
ANNDFNGYYRRAYQWADDIYPIDNQYHKDDNWGALYNAIAYANTVISEVPHVSDGTPAEI
NQLIAEAKIHRASAYLMLANTYAKPYLQVSANTDLGVPLVLQPTTEKSLDRGTLQQVYDA
ILADIETALPGLPAQQQFTTLPSKASAYGLLARTYLYMNRYAEAAKAADQALALNDKLND
LTKLTTTTMVNYPLRVSNPEILLSKIPVNGITAYTTTALRLSKDLLGLFDATDQRYNLFT
VPGSMISNWEVYDGRYFYLDYIKNEGRNVGPSVPEMLLIKAEAAARDNQPVVAMTLVNRL
RASRILPGSTVNLSATDAEDALVKVMQERRREFMFRMLRWWDMRRLKDDTRFQKTYTRTF
GGSTFTLAPNSNRYVFRIAQYEINLSPEIAQNP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacaggttgtgaaaaatatgtcgatatcaaaacccagggacaactgacaccggggacg
attgaaaactatcgttatctattaaataatacaaccgctttggaagctgcaccggcagtg
tcggatatggcttcggacgacctggaaatcatcgatggttcgccgcagcaactttccttg
gcgaacaatgattttaatggttattaccgcagggcgtatcagtgggcagatgatatttac
ccaattgacaaccaatatcacaaagatgacaactggggagcactttataatgcgatcgca
tatgctaacactgttatcagcgaggtacctcatgtttcagatggaactcctgctgaaatt
aaccagctgattgcggaggcaaagattcatcgcgcttcggcttacttgatgttggccaat
acgtatgctaaaccttacctgcaggtaagtgcgaatacggatttgggtgtacccttggtt
ttgcaaccaactacagaaaagtcgctcgatagaggtacgctgcaacaggtatatgatgct
attttggcggatattgaaacagcactgcctggcttgccggcacaacagcagtttacaacc
ttgccttccaaagcttcggcttatggtttattggcgcgcacgtacctttatatgaatcgc
tatgcggaggcagcaaaagcggccgaccaggcacttgcgctgaatgataaactgaacgat
ttgaccaagctgacaacaacgaccatggtcaattatccattgcgggtatccaatccggaa
atattgctgtctaaaatacccgttaatggaatcacggcctacaccaccaccgcgttacgc
ttgagtaaggaccttttgggcctgtttgatgccaccgatcagcgttataatttatttacg
gtgccggggtcaatgatatcaaattgggaggtttatgatggacgctacttttacctggac
tatatcaagaatgaaggccgaaatgtaggtccgtcggttcctgaaatgctattgattaag
gcggaggctgctgcgcgagacaatcagcctgtcgttgcaatgacattggtcaatcgttta
cgcgccagtagaattctgccggggtcaactgtcaatctcagcgcgacggatgctgaagat
gcattggtgaaagtgatgcaggaacgccgtcgtgagtttatgtttcgcatgctgcgctgg
tgggatatgcgccgtctcaaagacgacacacgcttccagaaaacttatacgcgtacattc
ggcggaagcaccttcacattggctccgaatagcaaccgctatgtgtttcggatcgcccaa
tacgaaatcaatttaagtcccgaaatagcgcaaaatccataa
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