Sphingobacterium sp. B29: BV902_23475
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Entry
BV902_23475 CDS
T04670
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
sphn
Sphingobacterium sp. B29
Pathway
sphn00300
Lysine biosynthesis
sphn00470
D-Amino acid metabolism
sphn00550
Peptidoglycan biosynthesis
sphn01100
Metabolic pathways
sphn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BV902_23475
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BV902_23475
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BV902_23475
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BV902_23475
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphn01011
]
BV902_23475
Enzymes [BR:
sphn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
BV902_23475
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
BV902_23475
Peptidoglycan biosynthesis and degradation proteins [BR:
sphn01011
]
Precursor biosynthesis
Amino acid ligase
BV902_23475
Racemase
BV902_23475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
APU98927
LinkDB
All DBs
Position
complement(5470730..5473171)
Genome browser
AA seq
813 aa
AA seq
DB search
MYKISEIAQILHPNRTFITDPNSFVQHLFYDSRKIAQADNGIFFALQKNRDGHRYIREAY
EKGVRNFVLQAEEGQEMELLEANILWVSDSLVAMQELATFHRQKFDYPFIGITGSNGKTI
VKEWLFQLMSPEYKIYRSPKSYNSQLGVALSLWGLSDQYNLALIEAGISEKGEMLRLEQM
IKPTIGLLTNIGVAHKAGFKSKEEKIYEKLELFKNVETMIFPNSYLENIQLPYRPRKFSW
GLDEGLSLEVYSIKQVNDRFTMVTFYYTGRTFAVEVPFVDKGNVENAINCVAVMLRFGYE
NEVIASRIKELQPVAMRLELKKGKKNSSIIDDSYSNDLDALQIALEFLNQQGQHPFKMLI
LSDIPGVHIEDEKSLSKLKRLLREYRLDKLILIGEVLPKVASQFDVPSISYSDTTAFLAD
IRSLSFENATVLLKGGREFHFERISQLLVAKSHDTVLEINLNALENNLNVYRQLLPKQVK
LMTMVKAFSYGSGSFEIANLLQFNRVDYLTVAFADEGVDLRGAGIKLPIVVMSPDESSFE
SIVQYNLEPEIYSFRILFSFLNFLKTKQIASFPIHIKIDTGMHRLGFMPDEVDRLIAVLR
AEAILEVKSAFSHLASAGNEKDREFTQRQIDLLDEFTKRLESGIGYSFLRHIAATSGIEL
WPNAYFDMVRLGIGLYGIDIERHDLPIREASTLKTNVTQIKYLPAGETVGYNRHGVLYRD
SKIATIKIGYADGYDRRFGNGVGKMLINGFLVPTIGDICMDMCMLDVTGVEVGEEDEVIV
YPDIKSAAKAIGTIPYELLTSISQRVKRVYFYE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaatatcggaaatcgcccagattttacatcctaatcgcacatttataacggat
cctaattcttttgtccagcatttattttatgacagccgtaaaattgcccaggcggacaac
gggattttttttgcacttcagaagaacagagatggtcatcggtatatccgggaagcctac
gaaaaaggagttcgtaattttgtgcttcaggccgaggagggacaggaaatggagcttttg
gaagctaatattctttgggtatcggatagtttagttgctatgcaggagctggcaactttt
catcgtcagaaatttgattatcctttcatcggaattactgggagcaatggcaaaacgatt
gtaaaagagtggcttttccagcttatgtctcctgaatataagatttaccgaagtcctaag
agctataattctcaacttggtgtggctttgtccttgtggggattgtccgatcagtataat
cttgcgctaatcgaagcggggatttcagaaaagggggaaatgctgcgccttgagcagatg
ataaaaccaactataggactattaaccaacatcggtgttgcccataaagctggtttcaaa
tctaaggaggaaaagatttatgaaaagctcgagctttttaaaaatgttgaaactatgatt
tttccaaatagttacctcgaaaatattcaattgccatatagaccacgaaaattttcttgg
gggcttgatgagggcctttcgttggaagtatactccatcaaacaggttaacgaccgattt
actatggtcacgttctattataccggtcgcacctttgctgttgaagtaccgtttgtggat
aaaggtaatgttgagaacgcgataaattgtgtagcggtgatgctacgttttggttatgaa
aatgaagtgatcgcatcgaggattaaagagttgcagccagtggcgatgcgtcttgaatta
aaaaaaggaaaaaagaatagctccattatcgatgactcgtatagtaatgatctagatgcg
ttgcagatagccctggagtttttaaatcagcaggggcagcatccgttcaagatgttgata
ttgtcggatatccctggtgtccatatcgaagatgaaaaaagtttgtccaagctgaaacgt
ttgcttcgtgagtatcgtttggataaattgatattgataggcgaagtgttgcctaaagtg
gcatcacaatttgatgtgccttctatttcatatagcgatacaactgctttcttggccgat
attaggtcgctttcttttgaaaatgccacggtgttattgaaaggaggacgtgagtttcat
tttgaacgtatcagtcagcttttagttgcaaaatcgcatgatacagtgcttgaaatcaat
ttgaatgcactcgagaataatttgaacgtatatcgacagctgctgccgaaacaggtgaag
ttgatgaccatggtcaaagctttttcttatggtagtggaagcttcgagatcgcaaatctt
ttgcaattcaatcgggtggattatctgacggttgcttttgcggatgagggagttgatttg
cgtggtgcgggcataaaattacctattgtagtgatgagccctgatgaaagttcttttgag
tccattgttcagtataaccttgaaccggaaatttatagctttagaatattgttctccttt
ttgaattttctgaaaacgaaacaaatagcttcttttccgattcatattaagatagataca
ggtatgcatcggttgggttttatgcctgacgaggtcgatcgtttaatagcggtgctacgt
gcggaagcgattttagaggttaaatctgcattttcccacttagcgtctgcaggtaatgaa
aaggatcgggaatttacacaacgacaaattgatctgctggatgagtttacaaagcgtctc
gaaagtggtataggatattcttttctacgtcatattgcagcaacatcgggtattgaattg
tggccgaatgcatattttgatatggtgaggttggggatagggctctatggtatcgatatt
gagcgccatgatttacccattagggaggcgagtaccttgaaaacgaatgtgacacagatt
aaatacctcccggcaggtgaaaccgtaggttataataggcacggcgtcctgtatagagac
agtaagattgcgacaattaaaattggttatgcggacggttacgataggcgttttggtaac
ggtgtgggtaaaatgttgataaacgggtttttagtccctactataggtgatatatgtatg
gatatgtgcatgttggatgttacgggtgtggaagttggagaggaagatgaagttatcgtg
taccctgatataaagtcagcggcgaaagctataggaacgattccttatgaactgctgacg
agtatttcccaacgcgtaaaaagagtatatttttatgaataa
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